Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
DUXBA0A1W2PPF3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DUXBA0A1W2PPF3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
DUXBA0A1W2PPF3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DUXBA0A1W2PPF3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
DUXBA0A1W2PPF3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
DUXBA0A1W2PPF3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
DUXBA0A1W2PPF3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DUXBA0A1W2PPF3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DUXBA0A1W2PPF3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 AC243591.1-201ENST00000452967 1364 ntBASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 AC010491.1-201ENST00000563101 2797 ntBASIC13.65□□□□□ -0.22
DUXBA0A1W2PPF3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
DUXBA0A1W2PPF3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 KRT8P39-201ENST00000396270 1433 ntBASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 AL031731.1-201ENST00000642131 2094 ntBASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 SNX33P1-201ENST00000592116 1762 ntBASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 MIR648-201ENST00000385046 94 ntBASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 AL645929.1-201ENST00000420084 975 ntBASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 AL590326.2-201ENST00000625139 305 ntBASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.64□□□□□ -0.23
DUXBA0A1W2PPF3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms