Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
AP4S1Q9Y587 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
AP4S1Q9Y587 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.83■□□□□ 0.13
AP4S1Q9Y587 FAM45BP-202ENST00000592932 1624 ntBASIC15.83■□□□□ 0.13
AP4S1Q9Y587 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 Z99916.2-201ENST00000604037 246 ntBASIC15.83■□□□□ 0.12
AP4S1Q9Y587 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 PRAL-201ENST00000624952 3286 ntBASIC15.83■□□□□ 0.12
AP4S1Q9Y587 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP4S1Q9Y587 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 AL365209.1-201ENST00000624418 6473 ntBASIC15.82■□□□□ 0.12
AP4S1Q9Y587 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 AC010947.1-201ENST00000623454 693 ntBASIC15.82■□□□□ 0.12
AP4S1Q9Y587 AC141257.4-201ENST00000634557 245 ntBASIC15.82■□□□□ 0.12
AP4S1Q9Y587 AC136944.6-201ENST00000634818 245 ntBASIC15.82■□□□□ 0.12
AP4S1Q9Y587 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP4S1Q9Y587 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms