Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 RPS2P1-201ENST00000434010 821 ntBASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 AL136379.1-201ENST00000623471 2642 ntBASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 EMBP1-201ENST00000458200 901 ntBASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 SLC25A6P2-201ENST00000497974 877 ntBASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 AC006557.2-201ENST00000592985 1240 ntBASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 REXO1L3P-201ENST00000622202 1288 ntBASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 AL805961.1-202ENST00000641562 540 ntBASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 AF228730.7-201ENST00000641842 219 ntBASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF11Q9Y3C5 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF11Q9Y3C5 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF11Q9Y3C5 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF11Q9Y3C5 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF11Q9Y3C5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF11Q9Y3C5 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF11Q9Y3C5 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF11Q9Y3C5 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RNF11Q9Y3C5 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RNF11Q9Y3C5 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF11Q9Y3C5 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF11Q9Y3C5 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RNF11Q9Y3C5 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
RNF11Q9Y3C5 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF11Q9Y3C5 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF11Q9Y3C5 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF11Q9Y3C5 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.29■□□□□ 0.2
RNF11Q9Y3C5 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF11Q9Y3C5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RNF11Q9Y3C5 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.29■□□□□ 0.2
RNF11Q9Y3C5 HLA-J-202ENST00000469281 1241 ntBASIC16.29■□□□□ 0.2
RNF11Q9Y3C5 RNPS1P1-201ENST00000507437 918 ntBASIC16.29■□□□□ 0.2
RNF11Q9Y3C5 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF11Q9Y3C5 OR7E14P-202ENST00000530490 1290 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms