Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH9Q9ULB4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH9Q9ULB4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
CDH9Q9ULB4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.58■□□□□ 0.41
CDH9Q9ULB4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CDH9Q9ULB4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH9Q9ULB4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.58■□□□□ 0.4
CDH9Q9ULB4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.58■□□□□ 0.4
CDH9Q9ULB4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH9Q9ULB4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH9Q9ULB4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH9Q9ULB4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.58■□□□□ 0.4
CDH9Q9ULB4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CDH9Q9ULB4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.58■□□□□ 0.4
CDH9Q9ULB4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.58■□□□□ 0.4
CDH9Q9ULB4 PRYP6-201ENST00000514804 343 ntBASIC17.58■□□□□ 0.4
CDH9Q9ULB4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.58■□□□□ 0.4
CDH9Q9ULB4 AC004449.1-201ENST00000564240 433 ntBASIC17.58■□□□□ 0.4
CDH9Q9ULB4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.58■□□□□ 0.4
CDH9Q9ULB4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.58■□□□□ 0.4
CDH9Q9ULB4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH9Q9ULB4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH9Q9ULB4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH9Q9ULB4 GPAA1P2-202ENST00000606848 1787 ntBASIC17.58■□□□□ 0.4
CDH9Q9ULB4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH9Q9ULB4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CDH9Q9ULB4 RNF216P1-203ENST00000404404 2427 ntBASIC17.58■□□□□ 0.4
CDH9Q9ULB4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
CDH9Q9ULB4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH9Q9ULB4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH9Q9ULB4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
CDH9Q9ULB4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH9Q9ULB4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH9Q9ULB4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.58■□□□□ 0.4
CDH9Q9ULB4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH9Q9ULB4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH9Q9ULB4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH9Q9ULB4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH9Q9ULB4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH9Q9ULB4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDH9Q9ULB4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDH9Q9ULB4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH9Q9ULB4 GPS2P2-201ENST00000430745 888 ntBASIC17.57■□□□□ 0.4
CDH9Q9ULB4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.57■□□□□ 0.4
CDH9Q9ULB4 AC109322.1-201ENST00000524499 1264 ntBASIC17.57■□□□□ 0.4
CDH9Q9ULB4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH9Q9ULB4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH9Q9ULB4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH9Q9ULB4 SLC25A39P2-201ENST00000537614 270 ntBASIC17.57■□□□□ 0.4
CDH9Q9ULB4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.57■□□□□ 0.4
CDH9Q9ULB4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.57■□□□□ 0.4
CDH9Q9ULB4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDH9Q9ULB4 GGT4P-201ENST00000623672 1708 ntBASIC17.57■□□□□ 0.4
CDH9Q9ULB4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH9Q9ULB4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.57■□□□□ 0.4
CDH9Q9ULB4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CDH9Q9ULB4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CDH9Q9ULB4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH9Q9ULB4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH9Q9ULB4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH9Q9ULB4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH9Q9ULB4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDH9Q9ULB4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 AC080080.1-201ENST00000625121 2420 ntBASIC17.56■□□□□ 0.4
CDH9Q9ULB4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 RBPMS2P1-201ENST00000437762 623 ntBASIC17.56■□□□□ 0.4
CDH9Q9ULB4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 AC025678.2-201ENST00000562061 970 ntBASIC17.56■□□□□ 0.4
CDH9Q9ULB4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 AC093028.1-201ENST00000622998 982 ntBASIC17.56■□□□□ 0.4
CDH9Q9ULB4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 AC073439.1-201ENST00000624121 1774 ntBASIC17.56■□□□□ 0.4
CDH9Q9ULB4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDH9Q9ULB4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH9Q9ULB4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CDH9Q9ULB4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH9Q9ULB4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH9Q9ULB4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms