Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL20A1Q9P218 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
COL20A1Q9P218 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL20A1Q9P218 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.73■□□□□ 0.59
COL20A1Q9P218 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL20A1Q9P218 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.73■□□□□ 0.59
COL20A1Q9P218 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.73■□□□□ 0.59
COL20A1Q9P218 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL20A1Q9P218 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.73■□□□□ 0.59
COL20A1Q9P218 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.73■□□□□ 0.59
COL20A1Q9P218 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.73■□□□□ 0.59
COL20A1Q9P218 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.73■□□□□ 0.59
COL20A1Q9P218 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.73■□□□□ 0.59
COL20A1Q9P218 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.73■□□□□ 0.59
COL20A1Q9P218 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL20A1Q9P218 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL20A1Q9P218 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL20A1Q9P218 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL20A1Q9P218 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.73■□□□□ 0.59
COL20A1Q9P218 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL20A1Q9P218 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL20A1Q9P218 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.72■□□□□ 0.59
COL20A1Q9P218 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.72■□□□□ 0.59
COL20A1Q9P218 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
COL20A1Q9P218 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL20A1Q9P218 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL20A1Q9P218 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
COL20A1Q9P218 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
COL20A1Q9P218 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
COL20A1Q9P218 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.72■□□□□ 0.59
COL20A1Q9P218 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
COL20A1Q9P218 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL20A1Q9P218 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL20A1Q9P218 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL20A1Q9P218 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.72■□□□□ 0.59
COL20A1Q9P218 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL20A1Q9P218 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL20A1Q9P218 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
COL20A1Q9P218 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL20A1Q9P218 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.72■□□□□ 0.59
COL20A1Q9P218 AL035633.1-201ENST00000406139 838 ntBASIC18.72■□□□□ 0.59
COL20A1Q9P218 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.72■□□□□ 0.59
COL20A1Q9P218 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.72■□□□□ 0.59
COL20A1Q9P218 TSSK5P-201ENST00000423978 907 ntBASIC18.72■□□□□ 0.59
COL20A1Q9P218 HLA-J-202ENST00000469281 1241 ntBASIC18.72■□□□□ 0.59
COL20A1Q9P218 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.72■□□□□ 0.59
COL20A1Q9P218 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.72■□□□□ 0.59
COL20A1Q9P218 AL138828.2-201ENST00000615812 383 ntBASIC18.72■□□□□ 0.59
COL20A1Q9P218 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
COL20A1Q9P218 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
COL20A1Q9P218 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
COL20A1Q9P218 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.72■□□□□ 0.59
COL20A1Q9P218 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL20A1Q9P218 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL20A1Q9P218 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL20A1Q9P218 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.72■□□□□ 0.59
COL20A1Q9P218 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL20A1Q9P218 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
COL20A1Q9P218 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL20A1Q9P218 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
COL20A1Q9P218 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL20A1Q9P218 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.72■□□□□ 0.59
COL20A1Q9P218 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
COL20A1Q9P218 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.71■□□□□ 0.59
COL20A1Q9P218 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL20A1Q9P218 HLA-A-202ENST00000376806 1854 ntBASIC18.71■□□□□ 0.59
COL20A1Q9P218 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
COL20A1Q9P218 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
COL20A1Q9P218 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
COL20A1Q9P218 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.71■□□□□ 0.59
COL20A1Q9P218 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.71■□□□□ 0.59
COL20A1Q9P218 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL20A1Q9P218 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL20A1Q9P218 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL20A1Q9P218 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
COL20A1Q9P218 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
COL20A1Q9P218 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL20A1Q9P218 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL20A1Q9P218 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.71■□□□□ 0.59
COL20A1Q9P218 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.71■□□□□ 0.59
COL20A1Q9P218 AC004890.2-204ENST00000481968 304 ntBASIC18.71■□□□□ 0.59
COL20A1Q9P218 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
COL20A1Q9P218 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.71■□□□□ 0.59
COL20A1Q9P218 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.71■□□□□ 0.59
COL20A1Q9P218 AC020765.3-201ENST00000613051 740 ntBASIC18.71■□□□□ 0.59
COL20A1Q9P218 AC073592.8-201ENST00000624126 511 ntBASIC18.71■□□□□ 0.59
COL20A1Q9P218 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
COL20A1Q9P218 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
COL20A1Q9P218 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
COL20A1Q9P218 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL20A1Q9P218 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL20A1Q9P218 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
COL20A1Q9P218 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL20A1Q9P218 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.71■□□□□ 0.59
COL20A1Q9P218 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
COL20A1Q9P218 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.71■□□□□ 0.59
COL20A1Q9P218 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.71■□□□□ 0.58
COL20A1Q9P218 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
COL20A1Q9P218 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL20A1Q9P218 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms