Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HACD3Q9P035 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HACD3Q9P035 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.91■□□□□ 0.3
HACD3Q9P035 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HACD3Q9P035 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HACD3Q9P035 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HACD3Q9P035 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HACD3Q9P035 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HACD3Q9P035 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.91■□□□□ 0.3
HACD3Q9P035 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HACD3Q9P035 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HACD3Q9P035 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HACD3Q9P035 AC104109.2-201ENST00000602919 1418 ntBASIC16.91■□□□□ 0.3
HACD3Q9P035 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.91■□□□□ 0.3
HACD3Q9P035 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
HACD3Q9P035 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.91■□□□□ 0.3
HACD3Q9P035 RPL13AP23-201ENST00000480739 586 ntBASIC16.91■□□□□ 0.3
HACD3Q9P035 AC087641.1-201ENST00000557561 1021 ntBASIC16.91■□□□□ 0.3
HACD3Q9P035 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.91■□□□□ 0.3
HACD3Q9P035 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.91■□□□□ 0.3
HACD3Q9P035 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.91■□□□□ 0.3
HACD3Q9P035 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HACD3Q9P035 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HACD3Q9P035 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.91■□□□□ 0.3
HACD3Q9P035 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HACD3Q9P035 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
HACD3Q9P035 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HACD3Q9P035 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HACD3Q9P035 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HACD3Q9P035 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HACD3Q9P035 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HACD3Q9P035 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HACD3Q9P035 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HACD3Q9P035 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.91■□□□□ 0.3
HACD3Q9P035 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HACD3Q9P035 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HACD3Q9P035 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HACD3Q9P035 ZNF259P1-201ENST00000407656 1365 ntBASIC16.9■□□□□ 0.3
HACD3Q9P035 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HACD3Q9P035 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HACD3Q9P035 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HACD3Q9P035 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HACD3Q9P035 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.9■□□□□ 0.3
HACD3Q9P035 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HACD3Q9P035 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HACD3Q9P035 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.9■□□□□ 0.3
HACD3Q9P035 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HACD3Q9P035 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HACD3Q9P035 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HACD3Q9P035 DOC2GP-204ENST00000639052 2548 ntBASIC16.9■□□□□ 0.3
HACD3Q9P035 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.9■□□□□ 0.3
HACD3Q9P035 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HACD3Q9P035 AL603756.1-201ENST00000606511 2163 ntBASIC16.9■□□□□ 0.3
HACD3Q9P035 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HACD3Q9P035 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.9■□□□□ 0.3
HACD3Q9P035 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.9■□□□□ 0.3
HACD3Q9P035 HCG4B-203ENST00000450128 991 ntBASIC16.9■□□□□ 0.3
HACD3Q9P035 HLA-J-202ENST00000469281 1241 ntBASIC16.9■□□□□ 0.3
HACD3Q9P035 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HACD3Q9P035 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.9■□□□□ 0.3
HACD3Q9P035 AC034105.1-201ENST00000563488 319 ntBASIC16.9■□□□□ 0.3
HACD3Q9P035 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.9■□□□□ 0.3
HACD3Q9P035 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HACD3Q9P035 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HACD3Q9P035 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HACD3Q9P035 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HACD3Q9P035 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
HACD3Q9P035 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HACD3Q9P035 PCDHA14-201ENST00000506751 2298 ntBASIC16.9■□□□□ 0.3
HACD3Q9P035 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HACD3Q9P035 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HACD3Q9P035 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.9■□□□□ 0.3
HACD3Q9P035 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
HACD3Q9P035 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HACD3Q9P035 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HACD3Q9P035 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.89■□□□□ 0.3
HACD3Q9P035 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
HACD3Q9P035 AC078925.2-201ENST00000624013 1973 ntBASIC16.89■□□□□ 0.3
HACD3Q9P035 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
HACD3Q9P035 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HACD3Q9P035 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HACD3Q9P035 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HACD3Q9P035 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HACD3Q9P035 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HACD3Q9P035 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.89■□□□□ 0.29
HACD3Q9P035 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HACD3Q9P035 PMS2P1-201ENST00000431037 1228 ntBASIC16.89■□□□□ 0.29
HACD3Q9P035 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.89■□□□□ 0.29
HACD3Q9P035 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HACD3Q9P035 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.89■□□□□ 0.29
HACD3Q9P035 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HACD3Q9P035 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.89■□□□□ 0.29
HACD3Q9P035 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.89■□□□□ 0.29
HACD3Q9P035 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HACD3Q9P035 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.89■□□□□ 0.29
HACD3Q9P035 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.89■□□□□ 0.29
HACD3Q9P035 AC120114.3-201ENST00000611923 658 ntBASIC16.89■□□□□ 0.29
HACD3Q9P035 ACTL9-202ENST00000612068 1252 ntBASIC16.89■□□□□ 0.29
HACD3Q9P035 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.89■□□□□ 0.29
HACD3Q9P035 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms