Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CISHQ9NSE2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CISHQ9NSE2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
CISHQ9NSE2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
CISHQ9NSE2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CISHQ9NSE2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CISHQ9NSE2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.76■□□□□ 0.43
CISHQ9NSE2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CISHQ9NSE2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.76■□□□□ 0.43
CISHQ9NSE2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.76■□□□□ 0.43
CISHQ9NSE2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.76■□□□□ 0.43
CISHQ9NSE2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CISHQ9NSE2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.76■□□□□ 0.43
CISHQ9NSE2 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.76■□□□□ 0.43
CISHQ9NSE2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.76■□□□□ 0.43
CISHQ9NSE2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.76■□□□□ 0.43
CISHQ9NSE2 AC091812.2-201ENST00000619081 385 ntBASIC17.76■□□□□ 0.43
CISHQ9NSE2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.76■□□□□ 0.43
CISHQ9NSE2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.76■□□□□ 0.43
CISHQ9NSE2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CISHQ9NSE2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CISHQ9NSE2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CISHQ9NSE2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.76■□□□□ 0.43
CISHQ9NSE2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.76■□□□□ 0.43
CISHQ9NSE2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CISHQ9NSE2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.76■□□□□ 0.43
CISHQ9NSE2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CISHQ9NSE2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.76■□□□□ 0.43
CISHQ9NSE2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CISHQ9NSE2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CISHQ9NSE2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CISHQ9NSE2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.75■□□□□ 0.43
CISHQ9NSE2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CISHQ9NSE2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.75■□□□□ 0.43
CISHQ9NSE2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CISHQ9NSE2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CISHQ9NSE2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CISHQ9NSE2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.75■□□□□ 0.43
CISHQ9NSE2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CISHQ9NSE2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CISHQ9NSE2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CISHQ9NSE2 YBX2P1-201ENST00000394192 760 ntBASIC17.75■□□□□ 0.43
CISHQ9NSE2 AC002056.1-201ENST00000395613 760 ntBASIC17.75■□□□□ 0.43
CISHQ9NSE2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CISHQ9NSE2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CISHQ9NSE2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CISHQ9NSE2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CISHQ9NSE2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CISHQ9NSE2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.75■□□□□ 0.43
CISHQ9NSE2 AC112191.1-201ENST00000523689 701 ntBASIC17.75■□□□□ 0.43
CISHQ9NSE2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CISHQ9NSE2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CISHQ9NSE2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CISHQ9NSE2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.75■□□□□ 0.43
CISHQ9NSE2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CISHQ9NSE2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.75■□□□□ 0.43
CISHQ9NSE2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.75■□□□□ 0.43
CISHQ9NSE2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CISHQ9NSE2 AC005052.1-201ENST00000625181 2492 ntBASIC17.75■□□□□ 0.43
CISHQ9NSE2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.75■□□□□ 0.43
CISHQ9NSE2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CISHQ9NSE2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CISHQ9NSE2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.74■□□□□ 0.43
CISHQ9NSE2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
CISHQ9NSE2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.74■□□□□ 0.43
CISHQ9NSE2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CISHQ9NSE2 AL118508.1-201ENST00000613502 2345 ntBASIC17.74■□□□□ 0.43
CISHQ9NSE2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CISHQ9NSE2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CISHQ9NSE2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CISHQ9NSE2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.74■□□□□ 0.43
CISHQ9NSE2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CISHQ9NSE2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CISHQ9NSE2 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.74■□□□□ 0.43
CISHQ9NSE2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.74■□□□□ 0.43
CISHQ9NSE2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CISHQ9NSE2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.74■□□□□ 0.43
CISHQ9NSE2 MTDHP5-201ENST00000598980 586 ntBASIC17.74■□□□□ 0.43
CISHQ9NSE2 AC099522.2-201ENST00000607001 744 ntBASIC17.74■□□□□ 0.43
CISHQ9NSE2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CISHQ9NSE2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CISHQ9NSE2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.74■□□□□ 0.43
CISHQ9NSE2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CISHQ9NSE2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CISHQ9NSE2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CISHQ9NSE2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CISHQ9NSE2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CISHQ9NSE2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CISHQ9NSE2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CISHQ9NSE2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CISHQ9NSE2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CISHQ9NSE2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CISHQ9NSE2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CISHQ9NSE2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CISHQ9NSE2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CISHQ9NSE2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CISHQ9NSE2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CISHQ9NSE2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
CISHQ9NSE2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CISHQ9NSE2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms