Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 AC027020.2-201ENST00000602585 2389 ntBASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 PCDHA5-203ENST00000614258 4248 ntBASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms