Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.81■□□□□ 0.76
RTN4Q9NQC3 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 AL158047.1-201ENST00000445918 881 ntBASIC19.81■□□□□ 0.76
RTN4Q9NQC3 RBM17P1-201ENST00000453646 1190 ntBASIC19.81■□□□□ 0.76
RTN4Q9NQC3 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 AC093915.1-201ENST00000605740 1543 ntBASIC19.81■□□□□ 0.76
RTN4Q9NQC3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 AC100803.2-201ENST00000562459 1963 ntBASIC19.81■□□□□ 0.76
RTN4Q9NQC3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RTN4Q9NQC3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 Z82170.1-201ENST00000625081 3192 ntBASIC19.8■□□□□ 0.76
RTN4Q9NQC3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 Z99916.2-201ENST00000604037 246 ntBASIC19.8■□□□□ 0.76
RTN4Q9NQC3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 TK2-221ENST00000620035 5060 ntTSL 2 BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.8■□□□□ 0.76
RTN4Q9NQC3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 AC007663.1-201ENST00000438948 1240 ntBASIC19.79■□□□□ 0.76
RTN4Q9NQC3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 BX088651.1-201ENST00000540551 451 ntBASIC19.79■□□□□ 0.76
RTN4Q9NQC3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.79■□□□□ 0.76
RTN4Q9NQC3 AC010240.3-201ENST00000607688 395 ntBASIC19.79■□□□□ 0.76
RTN4Q9NQC3 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms