Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CD248Q9HCU0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CD248Q9HCU0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
CD248Q9HCU0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CD248Q9HCU0 AC009336.1-201ENST00000608941 1553 ntBASIC17.62■□□□□ 0.41
CD248Q9HCU0 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.62■□□□□ 0.41
CD248Q9HCU0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CD248Q9HCU0 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 LYSMD4-203ENST00000378904 2122 ntBASIC17.62■□□□□ 0.41
CD248Q9HCU0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CD248Q9HCU0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CD248Q9HCU0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CD248Q9HCU0 PMS2P2-201ENST00000425039 1128 ntBASIC17.62■□□□□ 0.41
CD248Q9HCU0 DNAJB3-202ENST00000449667 1266 ntBASIC17.62■□□□□ 0.41
CD248Q9HCU0 AC004790.2-201ENST00000623588 572 ntBASIC17.62■□□□□ 0.41
CD248Q9HCU0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.62■□□□□ 0.41
CD248Q9HCU0 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.62■□□□□ 0.41
CD248Q9HCU0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CD248Q9HCU0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.62■□□□□ 0.41
CD248Q9HCU0 AC002310.6-201ENST00000624451 1377 ntBASIC17.62■□□□□ 0.41
CD248Q9HCU0 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CD248Q9HCU0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.62■□□□□ 0.41
CD248Q9HCU0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CD248Q9HCU0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CD248Q9HCU0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CD248Q9HCU0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD248Q9HCU0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.62■□□□□ 0.41
CD248Q9HCU0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD248Q9HCU0 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD248Q9HCU0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD248Q9HCU0 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD248Q9HCU0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.61■□□□□ 0.41
CD248Q9HCU0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD248Q9HCU0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD248Q9HCU0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CD248Q9HCU0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CD248Q9HCU0 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD248Q9HCU0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD248Q9HCU0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD248Q9HCU0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD248Q9HCU0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
CD248Q9HCU0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
CD248Q9HCU0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD248Q9HCU0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CD248Q9HCU0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD248Q9HCU0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD248Q9HCU0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.61■□□□□ 0.41
CD248Q9HCU0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.61■□□□□ 0.41
CD248Q9HCU0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD248Q9HCU0 CRYGEP-201ENST00000412192 528 ntBASIC17.61■□□□□ 0.41
CD248Q9HCU0 RPS8P6-201ENST00000426177 609 ntBASIC17.61■□□□□ 0.41
CD248Q9HCU0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.61■□□□□ 0.41
CD248Q9HCU0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
CD248Q9HCU0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.61■□□□□ 0.41
CD248Q9HCU0 ALG1L5P-201ENST00000482043 771 ntBASIC17.61■□□□□ 0.41
CD248Q9HCU0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.61■□□□□ 0.41
CD248Q9HCU0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.61■□□□□ 0.41
CD248Q9HCU0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.61■□□□□ 0.41
CD248Q9HCU0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.61■□□□□ 0.41
CD248Q9HCU0 OR7E47P-204ENST00000575924 449 ntBASIC17.61■□□□□ 0.41
CD248Q9HCU0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.61■□□□□ 0.41
CD248Q9HCU0 AL353135.1-201ENST00000606729 504 ntBASIC17.61■□□□□ 0.41
CD248Q9HCU0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.61■□□□□ 0.41
CD248Q9HCU0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.61■□□□□ 0.41
CD248Q9HCU0 GPR89P-201ENST00000407924 1495 ntBASIC17.61■□□□□ 0.41
CD248Q9HCU0 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD248Q9HCU0 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CD248Q9HCU0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms