Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 AC006538.1-201ENST00000567905 1585 ntBASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 TREML5P-201ENST00000421694 576 ntBASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 UGT1A2P-201ENST00000454886 866 ntBASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 AC025678.2-201ENST00000562061 970 ntBASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 MIR4453-201ENST00000584019 89 ntBASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 AL390754.1-201ENST00000619088 582 ntBASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 AC107890.1-201ENST00000422478 521 ntBASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 KLF2P3-201ENST00000451977 1087 ntBASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 AC073439.1-201ENST00000624121 1774 ntBASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.75□□□□□ -0.05
KIAA1549Q9HCM3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 SLC25A39P2-201ENST00000537614 270 ntBASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 AC073389.1-201ENST00000595595 795 ntBASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 ME2P1-201ENST00000426028 1970 ntBASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 MRPS18AP1-201ENST00000414458 589 ntBASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 MPDU1-223ENST00000582151 728 ntBASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 AC020765.3-201ENST00000613051 740 ntBASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms