Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VAT1LQ9HCJ6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 AL592309.1-201ENST00000443127 649 ntBASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 AP000344.2-201ENST00000512987 629 ntBASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 AC004835.2-201ENST00000603762 682 ntBASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 KRT8P39-201ENST00000396270 1433 ntBASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
VAT1LQ9HCJ6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 KRT18P28-201ENST00000453838 1332 ntBASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 AC005237.2-201ENST00000434368 219 ntBASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 AC027612.4-201ENST00000605371 583 ntBASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 WASH6P-202ENST00000359512 1437 ntBASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VAT1LQ9HCJ6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 AP002490.2-201ENST00000524791 560 ntBASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VAT1LQ9HCJ6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms