Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
UBQLN3Q9H347 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UBQLN3Q9H347 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
UBQLN3Q9H347 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
UBQLN3Q9H347 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
UBQLN3Q9H347 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
UBQLN3Q9H347 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
UBQLN3Q9H347 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
UBQLN3Q9H347 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
UBQLN3Q9H347 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 AC129492.6-201ENST00000611383 1305 ntBASIC15.47■□□□□ 0.07
UBQLN3Q9H347 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 MCCD1P2-201ENST00000423228 335 ntBASIC15.47■□□□□ 0.07
UBQLN3Q9H347 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 ACTL9-202ENST00000612068 1252 ntBASIC15.47■□□□□ 0.07
UBQLN3Q9H347 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 AC092865.6-201ENST00000642101 219 ntBASIC15.47■□□□□ 0.07
UBQLN3Q9H347 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 AL645728.1-201ENST00000366221 2101 ntBASIC15.47■□□□□ 0.07
UBQLN3Q9H347 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 AL662844.4-201ENST00000606367 2838 ntBASIC15.47■□□□□ 0.07
UBQLN3Q9H347 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBQLN3Q9H347 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
UBQLN3Q9H347 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
UBQLN3Q9H347 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.46■□□□□ 0.07
UBQLN3Q9H347 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UBQLN3Q9H347 TUBB8P12-201ENST00000308911 1335 ntBASIC15.46■□□□□ 0.07
UBQLN3Q9H347 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UBQLN3Q9H347 TUBB7P-202ENST00000428444 1305 ntBASIC15.46■□□□□ 0.07
UBQLN3Q9H347 TUBB8P7-204ENST00000567960 1332 ntBASIC15.46■□□□□ 0.07
UBQLN3Q9H347 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
UBQLN3Q9H347 HLA-A-202ENST00000376806 1854 ntBASIC15.46■□□□□ 0.07
UBQLN3Q9H347 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.46■□□□□ 0.07
UBQLN3Q9H347 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
UBQLN3Q9H347 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
UBQLN3Q9H347 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.46■□□□□ 0.07
UBQLN3Q9H347 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
UBQLN3Q9H347 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
UBQLN3Q9H347 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
UBQLN3Q9H347 DNAJB3-201ENST00000446806 729 ntBASIC15.46■□□□□ 0.07
UBQLN3Q9H347 AP002490.2-201ENST00000524791 560 ntBASIC15.46■□□□□ 0.07
UBQLN3Q9H347 AC107918.2-201ENST00000530817 355 ntBASIC15.46■□□□□ 0.07
UBQLN3Q9H347 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.46■□□□□ 0.07
UBQLN3Q9H347 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.46■□□□□ 0.07
UBQLN3Q9H347 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.46■□□□□ 0.07
UBQLN3Q9H347 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.46■□□□□ 0.07
UBQLN3Q9H347 AL513190.1-201ENST00000621254 727 ntBASIC15.46■□□□□ 0.07
UBQLN3Q9H347 REXO1L3P-201ENST00000622202 1288 ntBASIC15.46■□□□□ 0.07
UBQLN3Q9H347 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.46■□□□□ 0.07
UBQLN3Q9H347 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
UBQLN3Q9H347 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
UBQLN3Q9H347 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UBQLN3Q9H347 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
UBQLN3Q9H347 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
UBQLN3Q9H347 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
UBQLN3Q9H347 AC026691.1-201ENST00000602502 2017 ntBASIC15.46■□□□□ 0.07
UBQLN3Q9H347 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
UBQLN3Q9H347 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.46■□□□□ 0.06
UBQLN3Q9H347 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
UBQLN3Q9H347 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
UBQLN3Q9H347 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.06
UBQLN3Q9H347 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.46■□□□□ 0.06
UBQLN3Q9H347 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
UBQLN3Q9H347 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.46■□□□□ 0.06
UBQLN3Q9H347 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
UBQLN3Q9H347 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.46■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms