Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC141586.5-201ENST00000624546 2050 ntBASIC20.05■□□□□ 0.8
RTFDC1Q9BY42 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTFDC1Q9BY42 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RTFDC1Q9BY42 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTFDC1Q9BY42 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTFDC1Q9BY42 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTFDC1Q9BY42 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTFDC1Q9BY42 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 AL589702.1-201ENST00000641229 1509 ntBASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 SDHAP3-202ENST00000515467 728 ntBASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 AC024267.1-201ENST00000582320 895 ntBASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RTFDC1Q9BY42 AC092068.3-201ENST00000587894 2016 ntBASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 MEP1AP4-201ENST00000423244 1087 ntBASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 RN7SL837P-201ENST00000463010 287 ntBASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 AC004461.2-201ENST00000629517 803 ntBASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 AL139011.1-202ENST00000642063 584 ntBASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.03■□□□□ 0.8
RTFDC1Q9BY42 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 AC022210.1-201ENST00000449856 793 ntBASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms