Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 AC010327.4-202ENST00000591484 748 ntBASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 PCDHA14-201ENST00000506751 2298 ntBASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 C8orf49-201ENST00000525043 1968 ntBASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 KRT18P2-201ENST00000447938 1258 ntBASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 MIR3687-2-201ENST00000577708 61 ntBASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 AC006538.3-201ENST00000612495 578 ntBASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 MIR3687-1-201ENST00000614492 61 ntBASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 FLJ16779-201ENST00000612722 7638 ntBASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 LINC02012-201ENST00000608206 1725 ntBASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF1Q9BSM1 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 HCG4B-203ENST00000450128 991 ntBASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms