Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
USB1Q9BQ65 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
USB1Q9BQ65 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15□□□□□ -0.01
USB1Q9BQ65 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
USB1Q9BQ65 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15□□□□□ -0.01
USB1Q9BQ65 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15□□□□□ -0.01
USB1Q9BQ65 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
USB1Q9BQ65 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15□□□□□ -0.01
USB1Q9BQ65 LYSMD4-203ENST00000378904 2122 ntBASIC15□□□□□ -0.01
USB1Q9BQ65 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
USB1Q9BQ65 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15□□□□□ -0.01
USB1Q9BQ65 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
USB1Q9BQ65 PAWRP1-201ENST00000451083 565 ntBASIC15□□□□□ -0.01
USB1Q9BQ65 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15□□□□□ -0.01
USB1Q9BQ65 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
USB1Q9BQ65 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15□□□□□ -0.01
USB1Q9BQ65 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15□□□□□ -0.01
USB1Q9BQ65 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
USB1Q9BQ65 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15□□□□□ -0.01
USB1Q9BQ65 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
USB1Q9BQ65 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
USB1Q9BQ65 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
USB1Q9BQ65 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.99□□□□□ -0.01
USB1Q9BQ65 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
USB1Q9BQ65 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
USB1Q9BQ65 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
USB1Q9BQ65 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
USB1Q9BQ65 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
USB1Q9BQ65 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.99□□□□□ -0.01
USB1Q9BQ65 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
USB1Q9BQ65 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
USB1Q9BQ65 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.99□□□□□ -0.01
USB1Q9BQ65 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
USB1Q9BQ65 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
USB1Q9BQ65 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
USB1Q9BQ65 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
USB1Q9BQ65 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
USB1Q9BQ65 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
USB1Q9BQ65 YBX2P1-201ENST00000394192 760 ntBASIC14.99□□□□□ -0.01
USB1Q9BQ65 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.99□□□□□ -0.01
USB1Q9BQ65 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.99□□□□□ -0.01
USB1Q9BQ65 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
USB1Q9BQ65 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.99□□□□□ -0.01
USB1Q9BQ65 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.99□□□□□ -0.01
USB1Q9BQ65 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.99□□□□□ -0.01
USB1Q9BQ65 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.99□□□□□ -0.01
USB1Q9BQ65 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.99□□□□□ -0.01
USB1Q9BQ65 AL136370.1-201ENST00000608166 691 ntBASIC14.99□□□□□ -0.01
USB1Q9BQ65 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
USB1Q9BQ65 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
USB1Q9BQ65 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
USB1Q9BQ65 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.99□□□□□ -0.01
USB1Q9BQ65 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
USB1Q9BQ65 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.99□□□□□ -0.01
USB1Q9BQ65 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
USB1Q9BQ65 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
USB1Q9BQ65 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
USB1Q9BQ65 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
USB1Q9BQ65 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
USB1Q9BQ65 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
USB1Q9BQ65 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
USB1Q9BQ65 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
USB1Q9BQ65 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
USB1Q9BQ65 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
USB1Q9BQ65 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
USB1Q9BQ65 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
USB1Q9BQ65 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
USB1Q9BQ65 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.98□□□□□ -0.01
USB1Q9BQ65 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
USB1Q9BQ65 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
USB1Q9BQ65 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.98□□□□□ -0.01
USB1Q9BQ65 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
USB1Q9BQ65 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
USB1Q9BQ65 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
USB1Q9BQ65 PCDHB17P-201ENST00000539533 2393 ntBASIC14.98□□□□□ -0.01
USB1Q9BQ65 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms