Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CPNE1Q99829 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.71■□□□□ 0.27
CPNE1Q99829 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.71■□□□□ 0.27
CPNE1Q99829 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE1Q99829 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CPNE1Q99829 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE1Q99829 AL139384.1-201ENST00000612143 3047 ntBASIC16.71■□□□□ 0.27
CPNE1Q99829 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE1Q99829 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE1Q99829 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE1Q99829 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.71■□□□□ 0.27
CPNE1Q99829 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CPNE1Q99829 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CPNE1Q99829 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
CPNE1Q99829 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE1Q99829 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE1Q99829 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CPNE1Q99829 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.7■□□□□ 0.26
CPNE1Q99829 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE1Q99829 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.7■□□□□ 0.26
CPNE1Q99829 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CPNE1Q99829 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE1Q99829 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE1Q99829 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE1Q99829 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE1Q99829 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.7■□□□□ 0.26
CPNE1Q99829 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.7■□□□□ 0.26
CPNE1Q99829 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.7■□□□□ 0.26
CPNE1Q99829 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE1Q99829 SLC22A20-204ENST00000530038 1673 ntBASIC16.7■□□□□ 0.26
CPNE1Q99829 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE1Q99829 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE1Q99829 AL353732.1-201ENST00000569618 1459 ntBASIC16.7■□□□□ 0.26
CPNE1Q99829 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CPNE1Q99829 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.7■□□□□ 0.26
CPNE1Q99829 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE1Q99829 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE1Q99829 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.7■□□□□ 0.26
CPNE1Q99829 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE1Q99829 TSPY19P-201ENST00000418461 509 ntBASIC16.7■□□□□ 0.26
CPNE1Q99829 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.7■□□□□ 0.26
CPNE1Q99829 TSPY18P-201ENST00000441642 509 ntBASIC16.7■□□□□ 0.26
CPNE1Q99829 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.7■□□□□ 0.26
CPNE1Q99829 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.7■□□□□ 0.26
CPNE1Q99829 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.7■□□□□ 0.26
CPNE1Q99829 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.7■□□□□ 0.26
CPNE1Q99829 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CPNE1Q99829 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE1Q99829 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.7■□□□□ 0.26
CPNE1Q99829 CYP2A7P1-201ENST00000595391 815 ntBASIC16.7■□□□□ 0.26
CPNE1Q99829 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE1Q99829 REXO1L6P-202ENST00000619970 1078 ntBASIC16.7■□□□□ 0.26
CPNE1Q99829 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CPNE1Q99829 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.7■□□□□ 0.26
CPNE1Q99829 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.7■□□□□ 0.26
CPNE1Q99829 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE1Q99829 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE1Q99829 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE1Q99829 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE1Q99829 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE1Q99829 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.7■□□□□ 0.26
CPNE1Q99829 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE1Q99829 AC006449.6-201ENST00000612330 2296 ntBASIC16.7■□□□□ 0.26
CPNE1Q99829 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE1Q99829 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE1Q99829 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE1Q99829 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.69■□□□□ 0.26
CPNE1Q99829 GPAA1P2-202ENST00000606848 1787 ntBASIC16.69■□□□□ 0.26
CPNE1Q99829 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE1Q99829 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE1Q99829 AC006504.4-201ENST00000592118 1568 ntBASIC16.69■□□□□ 0.26
CPNE1Q99829 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.69■□□□□ 0.26
CPNE1Q99829 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CPNE1Q99829 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.69■□□□□ 0.26
CPNE1Q99829 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.69■□□□□ 0.26
CPNE1Q99829 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE1Q99829 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE1Q99829 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.69■□□□□ 0.26
CPNE1Q99829 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.69■□□□□ 0.26
CPNE1Q99829 ELK2BP-201ENST00000415014 1224 ntBASIC16.69■□□□□ 0.26
CPNE1Q99829 LAGE3P1-201ENST00000425356 484 ntBASIC16.69■□□□□ 0.26
CPNE1Q99829 PMS2P1-201ENST00000431037 1228 ntBASIC16.69■□□□□ 0.26
CPNE1Q99829 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.69■□□□□ 0.26
CPNE1Q99829 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.69■□□□□ 0.26
CPNE1Q99829 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE1Q99829 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.69■□□□□ 0.26
CPNE1Q99829 AC006557.2-201ENST00000592985 1240 ntBASIC16.69■□□□□ 0.26
CPNE1Q99829 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CPNE1Q99829 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE1Q99829 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE1Q99829 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
CPNE1Q99829 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE1Q99829 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE1Q99829 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CPNE1Q99829 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
CPNE1Q99829 PCGF3-213ENST00000620529 1899 ntBASIC16.69■□□□□ 0.26
CPNE1Q99829 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.69■□□□□ 0.26
CPNE1Q99829 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE1Q99829 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE1Q99829 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms