Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEK1Q96PY6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEK1Q96PY6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NEK1Q96PY6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEK1Q96PY6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NEK1Q96PY6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.73■□□□□ 0.75
NEK1Q96PY6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEK1Q96PY6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
NEK1Q96PY6 RNU1-129P-201ENST00000384064 167 ntBASIC19.73■□□□□ 0.75
NEK1Q96PY6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.73■□□□□ 0.75
NEK1Q96PY6 KRT18P2-201ENST00000447938 1258 ntBASIC19.73■□□□□ 0.75
NEK1Q96PY6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.73■□□□□ 0.75
NEK1Q96PY6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEK1Q96PY6 SLC25A1P1-201ENST00000528351 927 ntBASIC19.73■□□□□ 0.75
NEK1Q96PY6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.73■□□□□ 0.75
NEK1Q96PY6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.73■□□□□ 0.75
NEK1Q96PY6 U1.21-201ENST00000580816 167 ntBASIC19.73■□□□□ 0.75
NEK1Q96PY6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.73■□□□□ 0.75
NEK1Q96PY6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NEK1Q96PY6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.73■□□□□ 0.75
NEK1Q96PY6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.73■□□□□ 0.75
NEK1Q96PY6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.73■□□□□ 0.75
NEK1Q96PY6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEK1Q96PY6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NEK1Q96PY6 TNRC18P3-201ENST00000441896 2691 ntBASIC19.73■□□□□ 0.75
NEK1Q96PY6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEK1Q96PY6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NEK1Q96PY6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEK1Q96PY6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEK1Q96PY6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.73■□□□□ 0.75
NEK1Q96PY6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.73■□□□□ 0.75
NEK1Q96PY6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
NEK1Q96PY6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEK1Q96PY6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEK1Q96PY6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NEK1Q96PY6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEK1Q96PY6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NEK1Q96PY6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEK1Q96PY6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEK1Q96PY6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEK1Q96PY6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NEK1Q96PY6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NEK1Q96PY6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NEK1Q96PY6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.72■□□□□ 0.75
NEK1Q96PY6 AC007967.2-201ENST00000432613 625 ntBASIC19.72■□□□□ 0.75
NEK1Q96PY6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.72■□□□□ 0.75
NEK1Q96PY6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.72■□□□□ 0.75
NEK1Q96PY6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NEK1Q96PY6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.72■□□□□ 0.75
NEK1Q96PY6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.72■□□□□ 0.75
NEK1Q96PY6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.72■□□□□ 0.75
NEK1Q96PY6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NEK1Q96PY6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.72■□□□□ 0.75
NEK1Q96PY6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
NEK1Q96PY6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEK1Q96PY6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.72■□□□□ 0.75
NEK1Q96PY6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
NEK1Q96PY6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
NEK1Q96PY6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.72■□□□□ 0.75
NEK1Q96PY6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.71■□□□□ 0.75
NEK1Q96PY6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NEK1Q96PY6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK1Q96PY6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.71■□□□□ 0.75
NEK1Q96PY6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.71■□□□□ 0.75
NEK1Q96PY6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
NEK1Q96PY6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK1Q96PY6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK1Q96PY6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK1Q96PY6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK1Q96PY6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK1Q96PY6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK1Q96PY6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK1Q96PY6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK1Q96PY6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.71■□□□□ 0.75
NEK1Q96PY6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK1Q96PY6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NEK1Q96PY6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK1Q96PY6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK1Q96PY6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK1Q96PY6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
NEK1Q96PY6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.71■□□□□ 0.75
NEK1Q96PY6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.71■□□□□ 0.75
NEK1Q96PY6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.71■□□□□ 0.75
NEK1Q96PY6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.71■□□□□ 0.75
NEK1Q96PY6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK1Q96PY6 AC023141.13-201ENST00000604991 943 ntBASIC19.71■□□□□ 0.75
NEK1Q96PY6 AC007064.4-201ENST00000637740 555 ntBASIC19.71■□□□□ 0.75
NEK1Q96PY6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK1Q96PY6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK1Q96PY6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK1Q96PY6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NEK1Q96PY6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK1Q96PY6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK1Q96PY6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.71■□□□□ 0.75
NEK1Q96PY6 PCGF3-213ENST00000620529 1899 ntBASIC19.71■□□□□ 0.75
NEK1Q96PY6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.71■□□□□ 0.75
NEK1Q96PY6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK1Q96PY6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK1Q96PY6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.71■□□□□ 0.75
NEK1Q96PY6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms