Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNGAP1Q96PV0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 AP3S2-216ENST00000617003 1561 ntBASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 TSSK5P-201ENST00000423978 907 ntBASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 GAPDHP21-201ENST00000450301 1010 ntBASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 AC027369.6-201ENST00000525520 931 ntBASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 AL590560.3-201ENST00000623350 461 ntBASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYNGAP1Q96PV0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 SERBP1P5-201ENST00000510079 1181 ntBASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 AC009118.2-201ENST00000613275 655 ntBASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 AC009053.2-201ENST00000563701 2365 ntBASIC18.87■□□□□ 0.61
SYNGAP1Q96PV0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 SPDYE12P-201ENST00000618416 771 ntBASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms