Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AC092580.3-201ENST00000430932 139 ntBASIC19.34■□□□□ 0.69
CCDC17Q96LX7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC17Q96LX7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC17Q96LX7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.34■□□□□ 0.69
CCDC17Q96LX7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC17Q96LX7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC17Q96LX7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC17Q96LX7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC17Q96LX7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC17Q96LX7 AC073592.8-201ENST00000624126 511 ntBASIC19.34■□□□□ 0.69
CCDC17Q96LX7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC17Q96LX7 AC105020.1-201ENST00000435356 2205 ntBASIC19.34■□□□□ 0.69
CCDC17Q96LX7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC17Q96LX7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CCDC17Q96LX7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC17Q96LX7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC17Q96LX7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC17Q96LX7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC17Q96LX7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC17Q96LX7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC17Q96LX7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC17Q96LX7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC17Q96LX7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.33■□□□□ 0.69
CCDC17Q96LX7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC17Q96LX7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC17Q96LX7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC17Q96LX7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC17Q96LX7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC17Q96LX7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC17Q96LX7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC17Q96LX7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC17Q96LX7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC17Q96LX7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC17Q96LX7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.33■□□□□ 0.68
CCDC17Q96LX7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC17Q96LX7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC17Q96LX7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC17Q96LX7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.33■□□□□ 0.68
CCDC17Q96LX7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC17Q96LX7 MIR4745-201ENST00000577608 62 ntBASIC19.33■□□□□ 0.68
CCDC17Q96LX7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.33■□□□□ 0.68
CCDC17Q96LX7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC17Q96LX7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC17Q96LX7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC17Q96LX7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC17Q96LX7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CCDC17Q96LX7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC17Q96LX7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC17Q96LX7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CCDC17Q96LX7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC17Q96LX7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC17Q96LX7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC17Q96LX7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC17Q96LX7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC17Q96LX7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC17Q96LX7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC17Q96LX7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC17Q96LX7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC17Q96LX7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC17Q96LX7 AC241585.1-201ENST00000433527 519 ntBASIC19.32■□□□□ 0.68
CCDC17Q96LX7 RNA5SP410-201ENST00000516285 106 ntBASIC19.32■□□□□ 0.68
CCDC17Q96LX7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC17Q96LX7 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC17Q96LX7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC17Q96LX7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC17Q96LX7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.32■□□□□ 0.68
CCDC17Q96LX7 AL390754.1-201ENST00000619088 582 ntBASIC19.32■□□□□ 0.68
CCDC17Q96LX7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC17Q96LX7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC17Q96LX7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC17Q96LX7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC17Q96LX7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC17Q96LX7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC17Q96LX7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms