Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNX27Q96L92 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SNX27Q96L92 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNX27Q96L92 TERF1P3-201ENST00000505638 1227 ntBASIC17.94■□□□□ 0.46
SNX27Q96L92 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNX27Q96L92 AC073389.1-201ENST00000595595 795 ntBASIC17.94■□□□□ 0.46
SNX27Q96L92 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.94■□□□□ 0.46
SNX27Q96L92 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.94■□□□□ 0.46
SNX27Q96L92 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.94■□□□□ 0.46
SNX27Q96L92 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.94■□□□□ 0.46
SNX27Q96L92 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX27Q96L92 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX27Q96L92 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX27Q96L92 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX27Q96L92 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX27Q96L92 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
SNX27Q96L92 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX27Q96L92 AC012313.1-201ENST00000593393 3059 ntBASIC17.94■□□□□ 0.46
SNX27Q96L92 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.94■□□□□ 0.46
SNX27Q96L92 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.94■□□□□ 0.46
SNX27Q96L92 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
SNX27Q96L92 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.94■□□□□ 0.46
SNX27Q96L92 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SNX27Q96L92 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX27Q96L92 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.93■□□□□ 0.46
SNX27Q96L92 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.93■□□□□ 0.46
SNX27Q96L92 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX27Q96L92 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX27Q96L92 AC090340.1-201ENST00000620778 4980 ntBASIC17.93■□□□□ 0.46
SNX27Q96L92 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.93■□□□□ 0.46
SNX27Q96L92 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.93■□□□□ 0.46
SNX27Q96L92 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX27Q96L92 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX27Q96L92 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX27Q96L92 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.93■□□□□ 0.46
SNX27Q96L92 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX27Q96L92 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SNX27Q96L92 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
SNX27Q96L92 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNX27Q96L92 AC142381.1-201ENST00000426099 345 ntBASIC17.93■□□□□ 0.46
SNX27Q96L92 RBPMS2P1-201ENST00000437762 623 ntBASIC17.93■□□□□ 0.46
SNX27Q96L92 ATP5G2P4-201ENST00000442175 420 ntBASIC17.93■□□□□ 0.46
SNX27Q96L92 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.93■□□□□ 0.46
SNX27Q96L92 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.93■□□□□ 0.46
SNX27Q96L92 AC105233.2-201ENST00000523697 349 ntBASIC17.93■□□□□ 0.46
SNX27Q96L92 AF228730.5-201ENST00000530288 346 ntBASIC17.93■□□□□ 0.46
SNX27Q96L92 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SNX27Q96L92 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.93■□□□□ 0.46
SNX27Q96L92 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.93■□□□□ 0.46
SNX27Q96L92 AC005498.2-205ENST00000593218 784 ntBASIC17.93■□□□□ 0.46
SNX27Q96L92 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX27Q96L92 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.93■□□□□ 0.46
SNX27Q96L92 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.93■□□□□ 0.46
SNX27Q96L92 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX27Q96L92 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNX27Q96L92 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.93■□□□□ 0.46
SNX27Q96L92 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SNX27Q96L92 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX27Q96L92 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX27Q96L92 AC078925.2-201ENST00000624013 1973 ntBASIC17.93■□□□□ 0.46
SNX27Q96L92 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX27Q96L92 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.93■□□□□ 0.46
SNX27Q96L92 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX27Q96L92 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX27Q96L92 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX27Q96L92 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.92■□□□□ 0.46
SNX27Q96L92 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SNX27Q96L92 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNX27Q96L92 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNX27Q96L92 AC006538.1-201ENST00000567905 1585 ntBASIC17.92■□□□□ 0.46
SNX27Q96L92 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.92■□□□□ 0.46
SNX27Q96L92 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX27Q96L92 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX27Q96L92 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX27Q96L92 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX27Q96L92 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNX27Q96L92 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX27Q96L92 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.92■□□□□ 0.46
SNX27Q96L92 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX27Q96L92 SPDYE14P-201ENST00000442619 822 ntBASIC17.92■□□□□ 0.46
SNX27Q96L92 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.92■□□□□ 0.46
SNX27Q96L92 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.92■□□□□ 0.46
SNX27Q96L92 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.92■□□□□ 0.46
SNX27Q96L92 PRYP6-201ENST00000514804 343 ntBASIC17.92■□□□□ 0.46
SNX27Q96L92 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.92■□□□□ 0.46
SNX27Q96L92 AC025678.2-201ENST00000562061 970 ntBASIC17.92■□□□□ 0.46
SNX27Q96L92 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.92■□□□□ 0.46
SNX27Q96L92 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
SNX27Q96L92 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX27Q96L92 AP001059.3-201ENST00000619053 235 ntBASIC17.92■□□□□ 0.46
SNX27Q96L92 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.92■□□□□ 0.46
SNX27Q96L92 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX27Q96L92 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX27Q96L92 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX27Q96L92 AL031731.1-201ENST00000642131 2094 ntBASIC17.92■□□□□ 0.46
SNX27Q96L92 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNX27Q96L92 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX27Q96L92 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNX27Q96L92 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX27Q96L92 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms