Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 PRYP6-201ENST00000514804 343 ntBASIC16.69■□□□□ 0.26
SIPA1Q96FS4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.69■□□□□ 0.26
SIPA1Q96FS4 AC239800.4-201ENST00000603712 296 ntBASIC16.69■□□□□ 0.26
SIPA1Q96FS4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIPA1Q96FS4 AC092053.1-201ENST00000605787 1936 ntBASIC16.68■□□□□ 0.26
SIPA1Q96FS4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SIPA1Q96FS4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIPA1Q96FS4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.68■□□□□ 0.26
SIPA1Q96FS4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIPA1Q96FS4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIPA1Q96FS4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIPA1Q96FS4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIPA1Q96FS4 AC006277.1-201ENST00000624348 1610 ntBASIC16.68■□□□□ 0.26
SIPA1Q96FS4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
SIPA1Q96FS4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIPA1Q96FS4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIPA1Q96FS4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SIPA1Q96FS4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SIPA1Q96FS4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.68■□□□□ 0.26
SIPA1Q96FS4 AC092580.3-201ENST00000430932 139 ntBASIC16.68■□□□□ 0.26
SIPA1Q96FS4 AC241585.1-201ENST00000433527 519 ntBASIC16.68■□□□□ 0.26
SIPA1Q96FS4 FAM207CP-201ENST00000443486 507 ntBASIC16.68■□□□□ 0.26
SIPA1Q96FS4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIPA1Q96FS4 AC027369.6-201ENST00000525520 931 ntBASIC16.68■□□□□ 0.26
SIPA1Q96FS4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.68■□□□□ 0.26
SIPA1Q96FS4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.68■□□□□ 0.26
SIPA1Q96FS4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SIPA1Q96FS4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
SIPA1Q96FS4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIPA1Q96FS4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIPA1Q96FS4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIPA1Q96FS4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SIPA1Q96FS4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.68■□□□□ 0.26
SIPA1Q96FS4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 NOC2LP2-201ENST00000407594 1944 ntBASIC16.67■□□□□ 0.26
SIPA1Q96FS4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 LINC02560-201ENST00000596379 459 ntBASIC16.67■□□□□ 0.26
SIPA1Q96FS4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.67■□□□□ 0.26
SIPA1Q96FS4 AC013467.2-201ENST00000605472 835 ntBASIC16.67■□□□□ 0.26
SIPA1Q96FS4 AC073592.8-201ENST00000624126 511 ntBASIC16.67■□□□□ 0.26
SIPA1Q96FS4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.67■□□□□ 0.26
SIPA1Q96FS4 AC067852.2-201ENST00000590513 2313 ntBASIC16.67■□□□□ 0.26
SIPA1Q96FS4 OR6D1P-203ENST00000641209 4860 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 3051 ms