Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC97Q96F63 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CCDC97Q96F63 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC97Q96F63 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC97Q96F63 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CCDC97Q96F63 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC97Q96F63 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC97Q96F63 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC97Q96F63 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC97Q96F63 LINC00982-205ENST00000420957 435 ntBASIC17.12■□□□□ 0.33
CCDC97Q96F63 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC97Q96F63 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC97Q96F63 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.12■□□□□ 0.33
CCDC97Q96F63 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.12■□□□□ 0.33
CCDC97Q96F63 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CCDC97Q96F63 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC97Q96F63 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC97Q96F63 AC079416.2-201ENST00000625035 1193 ntBASIC17.12■□□□□ 0.33
CCDC97Q96F63 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC97Q96F63 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
CCDC97Q96F63 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CCDC97Q96F63 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC97Q96F63 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC97Q96F63 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC97Q96F63 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC97Q96F63 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC97Q96F63 PCDHA12-202ENST00000613593 2588 ntBASIC17.12■□□□□ 0.33
CCDC97Q96F63 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC97Q96F63 AC016396.2-201ENST00000562575 1417 ntBASIC17.12■□□□□ 0.33
CCDC97Q96F63 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC97Q96F63 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC97Q96F63 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC97Q96F63 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC97Q96F63 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC97Q96F63 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CCDC97Q96F63 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC97Q96F63 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC97Q96F63 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC97Q96F63 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC97Q96F63 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC97Q96F63 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC97Q96F63 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC97Q96F63 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC97Q96F63 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC97Q96F63 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC97Q96F63 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC97Q96F63 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC97Q96F63 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CCDC97Q96F63 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC97Q96F63 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC97Q96F63 PGAM5P1-201ENST00000518923 814 ntBASIC17.11■□□□□ 0.33
CCDC97Q96F63 IGHV3-22-201ENST00000520721 359 ntBASIC17.11■□□□□ 0.33
CCDC97Q96F63 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC97Q96F63 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC97Q96F63 AC012640.2-201ENST00000561606 901 ntBASIC17.11■□□□□ 0.33
CCDC97Q96F63 AC040169.1-201ENST00000565382 521 ntBASIC17.11■□□□□ 0.33
CCDC97Q96F63 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC97Q96F63 AC140113.2-201ENST00000604370 208 ntBASIC17.11■□□□□ 0.33
CCDC97Q96F63 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC97Q96F63 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC97Q96F63 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC97Q96F63 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC97Q96F63 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC97Q96F63 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC97Q96F63 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC97Q96F63 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC97Q96F63 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC97Q96F63 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC97Q96F63 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC97Q96F63 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CCDC97Q96F63 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC97Q96F63 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CCDC97Q96F63 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC97Q96F63 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC97Q96F63 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC97Q96F63 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC97Q96F63 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC97Q96F63 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC97Q96F63 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC97Q96F63 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC97Q96F63 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CCDC97Q96F63 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC97Q96F63 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC97Q96F63 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC97Q96F63 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC97Q96F63 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC97Q96F63 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CCDC97Q96F63 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC97Q96F63 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC97Q96F63 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC97Q96F63 PRYP5-201ENST00000451909 266 ntBASIC17.1■□□□□ 0.33
CCDC97Q96F63 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC97Q96F63 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC97Q96F63 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC97Q96F63 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC97Q96F63 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC97Q96F63 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC97Q96F63 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC97Q96F63 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC97Q96F63 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms