Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFT1Q96AA3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFT1Q96AA3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFT1Q96AA3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFT1Q96AA3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFT1Q96AA3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFT1Q96AA3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFT1Q96AA3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFT1Q96AA3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFT1Q96AA3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFT1Q96AA3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFT1Q96AA3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RFT1Q96AA3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFT1Q96AA3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFT1Q96AA3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFT1Q96AA3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.84□□□□□ -0.03
RFT1Q96AA3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFT1Q96AA3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFT1Q96AA3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RFT1Q96AA3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.84□□□□□ -0.03
RFT1Q96AA3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFT1Q96AA3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFT1Q96AA3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFT1Q96AA3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.84□□□□□ -0.03
RFT1Q96AA3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.84□□□□□ -0.03
RFT1Q96AA3 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.84□□□□□ -0.03
RFT1Q96AA3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFT1Q96AA3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.84□□□□□ -0.03
RFT1Q96AA3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFT1Q96AA3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.84□□□□□ -0.03
RFT1Q96AA3 AC103564.2-201ENST00000432853 1299 ntBASIC14.84□□□□□ -0.03
RFT1Q96AA3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RFT1Q96AA3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.84□□□□□ -0.03
RFT1Q96AA3 AL136038.3-201ENST00000561909 1096 ntBASIC14.84□□□□□ -0.03
RFT1Q96AA3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.84□□□□□ -0.03
RFT1Q96AA3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.84□□□□□ -0.03
RFT1Q96AA3 AL353801.3-201ENST00000609898 542 ntBASIC14.84□□□□□ -0.03
RFT1Q96AA3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.84□□□□□ -0.03
RFT1Q96AA3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.84□□□□□ -0.03
RFT1Q96AA3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.84□□□□□ -0.03
RFT1Q96AA3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFT1Q96AA3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFT1Q96AA3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFT1Q96AA3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RFT1Q96AA3 LINC02228-204ENST00000642115 2962 ntBASIC14.84□□□□□ -0.03
RFT1Q96AA3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.84□□□□□ -0.03
RFT1Q96AA3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.84□□□□□ -0.03
RFT1Q96AA3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.84□□□□□ -0.03
RFT1Q96AA3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RFT1Q96AA3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RFT1Q96AA3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.84□□□□□ -0.03
RFT1Q96AA3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.84□□□□□ -0.03
RFT1Q96AA3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFT1Q96AA3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFT1Q96AA3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.84□□□□□ -0.03
RFT1Q96AA3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RFT1Q96AA3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RFT1Q96AA3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
RFT1Q96AA3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
RFT1Q96AA3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RFT1Q96AA3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.03
RFT1Q96AA3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RFT1Q96AA3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RFT1Q96AA3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
RFT1Q96AA3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFT1Q96AA3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.83□□□□□ -0.04
RFT1Q96AA3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RFT1Q96AA3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFT1Q96AA3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFT1Q96AA3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFT1Q96AA3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFT1Q96AA3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFT1Q96AA3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.83□□□□□ -0.04
RFT1Q96AA3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.83□□□□□ -0.04
RFT1Q96AA3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.83□□□□□ -0.04
RFT1Q96AA3 BX276092.5-203ENST00000456199 560 ntBASIC14.83□□□□□ -0.04
RFT1Q96AA3 STK19B-204ENST00000512515 211 ntBASIC14.83□□□□□ -0.04
RFT1Q96AA3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.83□□□□□ -0.04
RFT1Q96AA3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.83□□□□□ -0.04
RFT1Q96AA3 STK25P1-201ENST00000585406 838 ntBASIC14.83□□□□□ -0.04
RFT1Q96AA3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFT1Q96AA3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFT1Q96AA3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFT1Q96AA3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFT1Q96AA3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RFT1Q96AA3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.83□□□□□ -0.04
RFT1Q96AA3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFT1Q96AA3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFT1Q96AA3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms