Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
BRF1Q92994 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRF1Q92994 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRF1Q92994 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.63■□□□□ 0.73
BRF1Q92994 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRF1Q92994 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRF1Q92994 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRF1Q92994 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.63■□□□□ 0.73
BRF1Q92994 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.63■□□□□ 0.73
BRF1Q92994 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.63■□□□□ 0.73
BRF1Q92994 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRF1Q92994 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRF1Q92994 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.63■□□□□ 0.73
BRF1Q92994 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRF1Q92994 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRF1Q92994 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRF1Q92994 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRF1Q92994 HMGA1P7-201ENST00000406908 502 ntBASIC19.63■□□□□ 0.73
BRF1Q92994 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.63■□□□□ 0.73
BRF1Q92994 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRF1Q92994 RPL13AP23-201ENST00000480739 586 ntBASIC19.63■□□□□ 0.73
BRF1Q92994 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.63■□□□□ 0.73
BRF1Q92994 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
BRF1Q92994 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
BRF1Q92994 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.63■□□□□ 0.73
BRF1Q92994 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRF1Q92994 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.63■□□□□ 0.73
BRF1Q92994 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRF1Q92994 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRF1Q92994 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRF1Q92994 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRF1Q92994 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRF1Q92994 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRF1Q92994 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRF1Q92994 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRF1Q92994 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRF1Q92994 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRF1Q92994 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.62■□□□□ 0.73
BRF1Q92994 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.62■□□□□ 0.73
BRF1Q92994 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRF1Q92994 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.62■□□□□ 0.73
BRF1Q92994 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.62■□□□□ 0.73
BRF1Q92994 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
BRF1Q92994 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRF1Q92994 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRF1Q92994 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
BRF1Q92994 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
BRF1Q92994 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.62■□□□□ 0.73
BRF1Q92994 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRF1Q92994 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
BRF1Q92994 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRF1Q92994 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
BRF1Q92994 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRF1Q92994 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.62■□□□□ 0.73
BRF1Q92994 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRF1Q92994 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRF1Q92994 AC026396.1-201ENST00000419388 421 ntBASIC19.62■□□□□ 0.73
BRF1Q92994 AL590627.1-203ENST00000421194 1026 ntBASIC19.62■□□□□ 0.73
BRF1Q92994 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRF1Q92994 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
BRF1Q92994 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRF1Q92994 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
BRF1Q92994 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRF1Q92994 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRF1Q92994 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.62■□□□□ 0.73
BRF1Q92994 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRF1Q92994 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRF1Q92994 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRF1Q92994 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRF1Q92994 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRF1Q92994 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.62■□□□□ 0.73
BRF1Q92994 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRF1Q92994 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRF1Q92994 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
BRF1Q92994 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.61■□□□□ 0.73
BRF1Q92994 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRF1Q92994 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRF1Q92994 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRF1Q92994 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
BRF1Q92994 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRF1Q92994 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
BRF1Q92994 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRF1Q92994 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRF1Q92994 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRF1Q92994 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRF1Q92994 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
BRF1Q92994 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.61■□□□□ 0.73
BRF1Q92994 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.61■□□□□ 0.73
BRF1Q92994 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.61■□□□□ 0.73
BRF1Q92994 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
BRF1Q92994 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRF1Q92994 SLC25A1P1-201ENST00000528351 927 ntBASIC19.61■□□□□ 0.73
BRF1Q92994 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.61■□□□□ 0.73
BRF1Q92994 AC096734.2-201ENST00000562054 433 ntBASIC19.61■□□□□ 0.73
BRF1Q92994 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRF1Q92994 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.61■□□□□ 0.73
BRF1Q92994 GPAA1P2-202ENST00000606848 1787 ntBASIC19.61■□□□□ 0.73
BRF1Q92994 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
BRF1Q92994 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRF1Q92994 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms