Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 AL109954.1-202ENST00000564051 2148 ntBASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 AC007292.2-201ENST00000593524 1812 ntBASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 POU5F1P6-201ENST00000466990 990 ntBASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 FAM197Y4-202ENST00000622692 608 ntBASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 AC113410.3-201ENST00000623366 203 ntBASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 AC079602.3-201ENST00000623931 403 ntBASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 AC020658.6-201ENST00000623564 1870 ntBASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.12□□□□□ -0.31
MBD3L1Q8WWY6 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 PENK-204ENST00000518770 863 ntTSL 2 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms