Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 AC009948.4-201ENST00000604692 675 ntBASIC16.94■□□□□ 0.3
PTCD2Q8WV60 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 AC092865.6-201ENST00000642101 219 ntBASIC16.94■□□□□ 0.3
PTCD2Q8WV60 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 AL162727.3-201ENST00000635661 2787 ntBASIC16.93■□□□□ 0.3
PTCD2Q8WV60 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 CRYGEP-201ENST00000412192 528 ntBASIC16.93■□□□□ 0.3
PTCD2Q8WV60 BX842568.4-201ENST00000421222 227 ntBASIC16.93■□□□□ 0.3
PTCD2Q8WV60 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 RNA5SP416-201ENST00000516838 111 ntBASIC16.93■□□□□ 0.3
PTCD2Q8WV60 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCD2Q8WV60 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 SLC25A6P2-201ENST00000497974 877 ntBASIC16.92■□□□□ 0.3
PTCD2Q8WV60 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.92■□□□□ 0.3
PTCD2Q8WV60 AC006538.3-201ENST00000612495 578 ntBASIC16.92■□□□□ 0.3
PTCD2Q8WV60 AL513190.1-201ENST00000621254 727 ntBASIC16.92■□□□□ 0.3
PTCD2Q8WV60 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 AC129492.6-201ENST00000611383 1305 ntBASIC16.92■□□□□ 0.3
PTCD2Q8WV60 AL353732.1-201ENST00000569618 1459 ntBASIC16.92■□□□□ 0.3
PTCD2Q8WV60 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms