Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 AC114501.1-201ENST00000445949 172 ntBASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 LINC00304-203ENST00000565008 1864 ntBASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 TDH-203ENST00000531764 1110 ntBASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 RN7SL399P-201ENST00000471648 279 ntBASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 ACTG1P3-201ENST00000431775 1114 ntBASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.12■□□□□ 0.33
PRUNE2Q8WUY3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 FTLP1-201ENST00000449155 526 ntBASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 SERBP1P3-201ENST00000459980 809 ntBASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 RN7SL720P-201ENST00000488178 304 ntBASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 HIST2H2BC-201ENST00000498492 580 ntBASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 SCARNA20.5-201ENST00000516991 142 ntBASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms