Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 CDK2AP2P3-201ENST00000422476 372 ntBASIC23.18■■□□□ 1.3
TMC1Q8TDI8 KRT18P32-201ENST00000424695 1287 ntBASIC23.18■■□□□ 1.3
TMC1Q8TDI8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 AC093512.1-201ENST00000617969 520 ntBASIC23.18■■□□□ 1.3
TMC1Q8TDI8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMC1Q8TDI8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 BSG-215ENST00000618006 1329 ntTSL 2 BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 IGHV3-62-201ENST00000520057 340 ntBASIC23.17■■□□□ 1.3
TMC1Q8TDI8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 MIR4492-201ENST00000581627 80 ntBASIC23.17■■□□□ 1.3
TMC1Q8TDI8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 UXT-AS1-201ENST00000590504 1525 ntBASIC23.17■■□□□ 1.3
TMC1Q8TDI8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 AGGF1P2-201ENST00000426656 2106 ntBASIC23.17■■□□□ 1.3
TMC1Q8TDI8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TMC1Q8TDI8 WASH6P-202ENST00000359512 1437 ntBASIC23.16■■□□□ 1.3
TMC1Q8TDI8 AC084018.2-201ENST00000613093 2607 ntBASIC23.16■■□□□ 1.3
TMC1Q8TDI8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMC1Q8TDI8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
TMC1Q8TDI8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC23.16■■□□□ 1.3
TMC1Q8TDI8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC23.16■■□□□ 1.3
TMC1Q8TDI8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMC1Q8TDI8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMC1Q8TDI8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMC1Q8TDI8 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
TMC1Q8TDI8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMC1Q8TDI8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TMC1Q8TDI8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TMC1Q8TDI8 LINC01225-203ENST00000563550 1244 ntBASIC23.16■■□□□ 1.3
TMC1Q8TDI8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMC1Q8TDI8 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
TMC1Q8TDI8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
TMC1Q8TDI8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMC1Q8TDI8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMC1Q8TDI8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC23.16■■□□□ 1.3
TMC1Q8TDI8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMC1Q8TDI8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC23.16■■□□□ 1.3
TMC1Q8TDI8 OR6D1P-203ENST00000641209 4860 ntBASIC23.16■■□□□ 1.3
TMC1Q8TDI8 AC016027.1-202ENST00000607927 1699 ntBASIC23.16■■□□□ 1.3
TMC1Q8TDI8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
TMC1Q8TDI8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TMC1Q8TDI8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
TMC1Q8TDI8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
TMC1Q8TDI8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TMC1Q8TDI8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TMC1Q8TDI8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TMC1Q8TDI8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TMC1Q8TDI8 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms