Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 LINC00895-201ENST00000629028 1637 ntBASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 ESRRAP1-201ENST00000400596 1257 ntBASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 AL355802.2-201ENST00000402069 882 ntBASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 AC007663.1-201ENST00000438948 1240 ntBASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 AC009947.2-201ENST00000444014 672 ntBASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 MTCL1P1-201ENST00000446207 792 ntBASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 AC073648.6-201ENST00000641589 218 ntBASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 AC116562.4-202ENST00000641738 218 ntBASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 LCK-206ENST00000373564 2137 ntTSL 5 BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 AL135999.2-201ENST00000622438 1686 ntBASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 FUT8-AS1-201ENST00000621019 1521 ntBASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC10.88□□□□□ -0.67
SMIM11BQ8TCY0 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 AC097374.2-201ENST00000618617 1306 ntBASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 SNX18-202ENST00000343017 3140 ntBASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 PC-204ENST00000524491 1714 ntTSL 2 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 CICP13-201ENST00000422015 2789 ntBASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 ID1-201ENST00000376105 1233 ntBASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 DDT-203ENST00000403754 569 ntTSL 3 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 DDT-206ENST00000430101 573 ntTSL 2 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 SAPCD2P2-201ENST00000431719 1174 ntBASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 GXYLT1P6-201ENST00000456472 1187 ntBASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 REXO1L10P-201ENST00000615707 1290 ntBASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 REXO1L12P-201ENST00000622156 912 ntBASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms