Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 REEP1-202ENST00000453231 940 ntTSL 2 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 KC6-205ENST00000599934 556 ntTSL 4 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 AC009113.1-201ENST00000570267 2443 ntBASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 AC026954.1-201ENST00000429771 1293 ntBASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 KRT8P19-201ENST00000551916 1455 ntBASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 FAM86LP-201ENST00000478302 853 ntBASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 AC006277.1-201ENST00000624348 1610 ntBASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 TMEM198B-204ENST00000484016 896 ntBASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 AC104457.1-201ENST00000401024 814 ntBASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 MTX1P1-201ENST00000440904 838 ntBASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 AC091804.1-201ENST00000486888 567 ntBASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 AC026979.3-201ENST00000607315 403 ntBASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 AC128714.1-201ENST00000637035 887 ntBASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
ALMS1Q8TCU4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 BX323043.1-201ENST00000641006 1765 ntBASIC11□□□□□ -0.65
ALMS1Q8TCU4 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 MIR6069-201ENST00000620069 79 ntBASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms