Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PCDHB19P-201ENST00000570871 2371 ntBASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 AC107890.1-201ENST00000422478 521 ntBASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 AJ011932.1-201ENST00000621707 465 ntBASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHKBP1Q8TBC3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 MIR346-201ENST00000362234 95 ntBASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 MIR4492-201ENST00000581627 80 ntBASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 CYP2A7P1-201ENST00000595391 815 ntBASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 AL021920.2-201ENST00000624828 1351 ntBASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 BCL2-203ENST00000589955 5011 ntBASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHKBP1Q8TBC3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 ALG1L8P-201ENST00000533887 760 ntBASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 AL138918.1-201ENST00000568306 659 ntBASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 FO538757.1-201ENST00000623083 1397 ntBASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms