Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 AL021920.2-201ENST00000624828 1351 ntBASIC12.52□□□□□ -0.41
NUP35Q8NFH5 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 SNX18-202ENST00000343017 3140 ntBASIC12.51□□□□□ -0.41
NUP35Q8NFH5 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 AC097637.2-201ENST00000624096 1997 ntBASIC12.51□□□□□ -0.41
NUP35Q8NFH5 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 AC007967.3-201ENST00000434308 558 ntBASIC12.51□□□□□ -0.41
NUP35Q8NFH5 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 CICP13-201ENST00000422015 2789 ntBASIC12.51□□□□□ -0.41
NUP35Q8NFH5 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
NUP35Q8NFH5 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 AC107956.1-201ENST00000494359 873 ntBASIC12.5□□□□□ -0.41
NUP35Q8NFH5 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 DUX4L17-201ENST00000557360 1267 ntBASIC12.5□□□□□ -0.41
NUP35Q8NFH5 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 AL512604.3-201ENST00000569583 964 ntBASIC12.5□□□□□ -0.41
NUP35Q8NFH5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms