Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SETD9Q8NE22 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.38■□□□□ 0.05
SETD9Q8NE22 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SETD9Q8NE22 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SETD9Q8NE22 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SETD9Q8NE22 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SETD9Q8NE22 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.38■□□□□ 0.05
SETD9Q8NE22 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SETD9Q8NE22 KLF4P1-201ENST00000412782 1185 ntBASIC15.38■□□□□ 0.05
SETD9Q8NE22 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SETD9Q8NE22 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SETD9Q8NE22 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.38■□□□□ 0.05
SETD9Q8NE22 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SETD9Q8NE22 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
SETD9Q8NE22 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.38■□□□□ 0.05
SETD9Q8NE22 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
SETD9Q8NE22 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SETD9Q8NE22 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.38■□□□□ 0.05
SETD9Q8NE22 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SETD9Q8NE22 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SETD9Q8NE22 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SETD9Q8NE22 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
SETD9Q8NE22 AC006277.1-201ENST00000624348 1610 ntBASIC15.38■□□□□ 0.05
SETD9Q8NE22 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SETD9Q8NE22 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.38■□□□□ 0.05
SETD9Q8NE22 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
SETD9Q8NE22 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SETD9Q8NE22 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.38■□□□□ 0.05
SETD9Q8NE22 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SETD9Q8NE22 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SETD9Q8NE22 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SETD9Q8NE22 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SETD9Q8NE22 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SETD9Q8NE22 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SETD9Q8NE22 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SETD9Q8NE22 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SETD9Q8NE22 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SETD9Q8NE22 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SETD9Q8NE22 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
SETD9Q8NE22 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.37■□□□□ 0.05
SETD9Q8NE22 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SETD9Q8NE22 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SETD9Q8NE22 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
SETD9Q8NE22 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SETD9Q8NE22 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SETD9Q8NE22 KRT8P49-201ENST00000604166 1432 ntBASIC15.37■□□□□ 0.05
SETD9Q8NE22 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.37■□□□□ 0.05
SETD9Q8NE22 AC097637.2-201ENST00000624096 1997 ntBASIC15.37■□□□□ 0.05
SETD9Q8NE22 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.37■□□□□ 0.05
SETD9Q8NE22 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SETD9Q8NE22 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SETD9Q8NE22 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SETD9Q8NE22 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SETD9Q8NE22 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.37■□□□□ 0.05
SETD9Q8NE22 FAM201B-201ENST00000458407 597 ntBASIC15.37■□□□□ 0.05
SETD9Q8NE22 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.37■□□□□ 0.05
SETD9Q8NE22 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SETD9Q8NE22 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SETD9Q8NE22 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.37■□□□□ 0.05
SETD9Q8NE22 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
SETD9Q8NE22 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SETD9Q8NE22 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.37■□□□□ 0.05
SETD9Q8NE22 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.37■□□□□ 0.05
SETD9Q8NE22 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.37■□□□□ 0.05
SETD9Q8NE22 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SETD9Q8NE22 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
SETD9Q8NE22 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SETD9Q8NE22 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SETD9Q8NE22 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SETD9Q8NE22 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.37■□□□□ 0.05
SETD9Q8NE22 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
SETD9Q8NE22 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SETD9Q8NE22 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SETD9Q8NE22 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SETD9Q8NE22 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SETD9Q8NE22 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SETD9Q8NE22 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.36■□□□□ 0.05
SETD9Q8NE22 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
SETD9Q8NE22 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.36■□□□□ 0.05
SETD9Q8NE22 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.36■□□□□ 0.05
SETD9Q8NE22 AC013268.4-201ENST00000637413 2228 ntBASIC15.36■□□□□ 0.05
SETD9Q8NE22 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.36■□□□□ 0.05
SETD9Q8NE22 AC125634.1-201ENST00000438758 1403 ntBASIC15.36■□□□□ 0.05
SETD9Q8NE22 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SETD9Q8NE22 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SETD9Q8NE22 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SETD9Q8NE22 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.36■□□□□ 0.05
SETD9Q8NE22 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SETD9Q8NE22 AL161772.1-201ENST00000610494 4412 ntBASIC15.36■□□□□ 0.05
SETD9Q8NE22 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SETD9Q8NE22 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SETD9Q8NE22 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SETD9Q8NE22 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.36■□□□□ 0.05
SETD9Q8NE22 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.36■□□□□ 0.05
SETD9Q8NE22 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.36■□□□□ 0.05
SETD9Q8NE22 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.36■□□□□ 0.05
SETD9Q8NE22 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.36■□□□□ 0.05
SETD9Q8NE22 AC005332.3-201ENST00000589904 676 ntBASIC15.36■□□□□ 0.05
SETD9Q8NE22 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.36■□□□□ 0.05
SETD9Q8NE22 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms