Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
LINC00311Q8N616 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00311Q8N616 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC00311Q8N616 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00311Q8N616 AC092474.2-201ENST00000424288 719 ntBASIC13.5□□□□□ -0.25
LINC00311Q8N616 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00311Q8N616 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00311Q8N616 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.5□□□□□ -0.25
LINC00311Q8N616 AC007967.2-201ENST00000432613 625 ntBASIC13.5□□□□□ -0.25
LINC00311Q8N616 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC00311Q8N616 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00311Q8N616 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC00311Q8N616 SLC25A1P1-201ENST00000528351 927 ntBASIC13.5□□□□□ -0.25
LINC00311Q8N616 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 PDPK2P-202ENST00000562415 1191 ntBASIC13.5□□□□□ -0.25
LINC00311Q8N616 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.5□□□□□ -0.25
LINC00311Q8N616 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC00311Q8N616 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00311Q8N616 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
LINC00311Q8N616 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LINC00311Q8N616 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00311Q8N616 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LINC00311Q8N616 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00311Q8N616 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC00311Q8N616 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00311Q8N616 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00311Q8N616 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC00311Q8N616 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00311Q8N616 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
LINC00311Q8N616 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC00311Q8N616 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00311Q8N616 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00311Q8N616 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
LINC00311Q8N616 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00311Q8N616 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00311Q8N616 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00311Q8N616 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00311Q8N616 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00311Q8N616 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
LINC00311Q8N616 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
LINC00311Q8N616 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.49□□□□□ -0.25
LINC00311Q8N616 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00311Q8N616 MED15P5-201ENST00000423150 992 ntBASIC13.49□□□□□ -0.25
LINC00311Q8N616 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00311Q8N616 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00311Q8N616 KRT18P3-201ENST00000451602 1288 ntBASIC13.49□□□□□ -0.25
LINC00311Q8N616 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00311Q8N616 AC074386.1-202ENST00000463561 864 ntBASIC13.49□□□□□ -0.25
LINC00311Q8N616 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00311Q8N616 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00311Q8N616 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC00311Q8N616 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.49□□□□□ -0.25
LINC00311Q8N616 AC018845.2-201ENST00000568326 409 ntBASIC13.49□□□□□ -0.25
LINC00311Q8N616 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
LINC00311Q8N616 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00311Q8N616 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00311Q8N616 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.49□□□□□ -0.25
LINC00311Q8N616 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.49□□□□□ -0.25
LINC00311Q8N616 AC140113.2-201ENST00000604370 208 ntBASIC13.49□□□□□ -0.25
LINC00311Q8N616 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.49□□□□□ -0.25
LINC00311Q8N616 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00311Q8N616 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00311Q8N616 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00311Q8N616 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00311Q8N616 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00311Q8N616 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00311Q8N616 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00311Q8N616 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00311Q8N616 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00311Q8N616 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
LINC00311Q8N616 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00311Q8N616 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LINC00311Q8N616 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LINC00311Q8N616 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00311Q8N616 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00311Q8N616 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00311Q8N616 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00311Q8N616 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00311Q8N616 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms