Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 MIR4492-201ENST00000581627 80 ntBASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 AC006449.6-201ENST00000612330 2296 ntBASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 AC016734.2-201ENST00000624325 1377 ntBASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 IGHV3-47-201ENST00000425060 335 ntBASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 TSSC2-201ENST00000450217 709 ntBASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 DUX4L26-201ENST00000489078 1255 ntBASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 MPDU1-223ENST00000582151 728 ntBASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 AC092329.2-201ENST00000598402 547 ntBASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 AF228730.7-201ENST00000641842 219 ntBASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms