Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 AC008764.6-201ENST00000595909 2069 ntBASIC17.99■□□□□ 0.47
HERC6Q8IVU3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 LINC00896-202ENST00000609602 2128 ntBASIC17.98■□□□□ 0.47
HERC6Q8IVU3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 AL512384.1-201ENST00000406683 331 ntBASIC17.98■□□□□ 0.47
HERC6Q8IVU3 AP006294.1-201ENST00000415407 339 ntBASIC17.98■□□□□ 0.47
HERC6Q8IVU3 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 DFFBP1-201ENST00000433250 979 ntBASIC17.98■□□□□ 0.47
HERC6Q8IVU3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 GNAQP1-201ENST00000444815 1067 ntBASIC17.98■□□□□ 0.47
HERC6Q8IVU3 RN7SL752P-201ENST00000463779 287 ntBASIC17.98■□□□□ 0.47
HERC6Q8IVU3 PRYP6-201ENST00000514804 343 ntBASIC17.98■□□□□ 0.47
HERC6Q8IVU3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 CYP2A7P1-201ENST00000595391 815 ntBASIC17.98■□□□□ 0.47
HERC6Q8IVU3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 AL162274.1-201ENST00000617191 1098 ntBASIC17.98■□□□□ 0.47
HERC6Q8IVU3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 EGFEM1P-202ENST00000431685 1563 ntBASIC17.98■□□□□ 0.47
HERC6Q8IVU3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 AC012313.1-201ENST00000593393 3059 ntBASIC17.98■□□□□ 0.47
HERC6Q8IVU3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HERC6Q8IVU3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 RPS2P32-201ENST00000439199 892 ntBASIC17.97■□□□□ 0.47
HERC6Q8IVU3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 AC135586.1-201ENST00000539323 574 ntBASIC17.97■□□□□ 0.47
HERC6Q8IVU3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 AC104794.3-201ENST00000566840 1248 ntBASIC17.97■□□□□ 0.47
HERC6Q8IVU3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 RN7SL828P-201ENST00000607615 303 ntBASIC17.97■□□□□ 0.47
HERC6Q8IVU3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.97■□□□□ 0.47
HERC6Q8IVU3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.96■□□□□ 0.47
HERC6Q8IVU3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.96■□□□□ 0.47
HERC6Q8IVU3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HERC6Q8IVU3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HERC6Q8IVU3 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HERC6Q8IVU3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HERC6Q8IVU3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HERC6Q8IVU3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.96■□□□□ 0.47
HERC6Q8IVU3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HERC6Q8IVU3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
HERC6Q8IVU3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HERC6Q8IVU3 AC079776.1-201ENST00000401540 1152 ntBASIC17.96■□□□□ 0.47
HERC6Q8IVU3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.96■□□□□ 0.47
HERC6Q8IVU3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms