Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 GNAQP1-201ENST00000444815 1067 ntBASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 SERBP1P3-201ENST00000459980 809 ntBASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 AL512361.1-201ENST00000554200 418 ntBASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 AC010336.2-201ENST00000564226 506 ntBASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 AC020765.3-201ENST00000613051 740 ntBASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 AL391825.1-201ENST00000457671 1364 ntBASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 AC087499.6-201ENST00000411576 835 ntBASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 AC007274.1-201ENST00000439805 662 ntBASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 AC026979.3-201ENST00000607315 403 ntBASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NPAS4Q8IUM7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 AC093004.1-201ENST00000508850 424 ntBASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms