Protein–RNA interactions for Protein: Q86WV1

SKAP1, Src kinase-associated phosphoprotein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1Q86WV1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SKAP1Q86WV1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SKAP1Q86WV1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SKAP1Q86WV1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SKAP1Q86WV1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.84■□□□□ 0.93
SKAP1Q86WV1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.84■□□□□ 0.93
SKAP1Q86WV1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
SKAP1Q86WV1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SKAP1Q86WV1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SKAP1Q86WV1 REXO1L3P-201ENST00000622202 1288 ntBASIC20.84■□□□□ 0.93
SKAP1Q86WV1 AP000550.4-202ENST00000639755 178 ntBASIC20.84■□□□□ 0.93
SKAP1Q86WV1 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SKAP1Q86WV1 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SKAP1Q86WV1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SKAP1Q86WV1 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SKAP1Q86WV1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SKAP1Q86WV1 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC20.84■□□□□ 0.93
SKAP1Q86WV1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
SKAP1Q86WV1 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SKAP1Q86WV1 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SKAP1Q86WV1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.84■□□□□ 0.93
SKAP1Q86WV1 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SKAP1Q86WV1 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SKAP1Q86WV1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SKAP1Q86WV1 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SKAP1Q86WV1 TSPY26P-202ENST00000565928 3884 ntBASIC20.83■□□□□ 0.93
SKAP1Q86WV1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SKAP1Q86WV1 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SKAP1Q86WV1 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SKAP1Q86WV1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SKAP1Q86WV1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SKAP1Q86WV1 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
SKAP1Q86WV1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SKAP1Q86WV1 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SKAP1Q86WV1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SKAP1Q86WV1 PAWRP1-201ENST00000451083 565 ntBASIC20.83■□□□□ 0.93
SKAP1Q86WV1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.83■□□□□ 0.93
SKAP1Q86WV1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.83■□□□□ 0.93
SKAP1Q86WV1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.83■□□□□ 0.93
SKAP1Q86WV1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SKAP1Q86WV1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.83■□□□□ 0.93
SKAP1Q86WV1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SKAP1Q86WV1 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.83■□□□□ 0.92
SKAP1Q86WV1 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SKAP1Q86WV1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SKAP1Q86WV1 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC20.83■□□□□ 0.92
SKAP1Q86WV1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.83■□□□□ 0.92
SKAP1Q86WV1 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SKAP1Q86WV1 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 KRT18P35-201ENST00000510488 1269 ntBASIC20.82■□□□□ 0.92
SKAP1Q86WV1 AC069148.1-201ENST00000608741 768 ntBASIC20.82■□□□□ 0.92
SKAP1Q86WV1 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SKAP1Q86WV1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SKAP1Q86WV1 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SKAP1Q86WV1 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SKAP1Q86WV1 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SKAP1Q86WV1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
SKAP1Q86WV1 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SKAP1Q86WV1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SKAP1Q86WV1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SKAP1Q86WV1 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SKAP1Q86WV1 PTCHD3P3-201ENST00000403073 906 ntBASIC20.81■□□□□ 0.92
SKAP1Q86WV1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.81■□□□□ 0.92
SKAP1Q86WV1 ATP5G2P1-201ENST00000433580 426 ntBASIC20.81■□□□□ 0.92
SKAP1Q86WV1 FAM210CP-201ENST00000445714 574 ntBASIC20.81■□□□□ 0.92
SKAP1Q86WV1 AC087163.2-201ENST00000457299 853 ntBASIC20.81■□□□□ 0.92
SKAP1Q86WV1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.81■□□□□ 0.92
SKAP1Q86WV1 MPDU1-223ENST00000582151 728 ntBASIC20.81■□□□□ 0.92
SKAP1Q86WV1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.81■□□□□ 0.92
SKAP1Q86WV1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.81■□□□□ 0.92
SKAP1Q86WV1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.81■□□□□ 0.92
SKAP1Q86WV1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.81■□□□□ 0.92
SKAP1Q86WV1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.81■□□□□ 0.92
SKAP1Q86WV1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms