Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 AC139887.3-201ENST00000568585 713 ntBASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CCNI2Q6ZMN8 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 IGHGP-201ENST00000390555 1178 ntBASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 MINOS1P3-201ENST00000457048 203 ntBASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 AC073648.2-201ENST00000510116 352 ntBASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 GPR89P-201ENST00000407924 1495 ntBASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNI2Q6ZMN8 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 AL591684.3-201ENST00000605187 298 ntBASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 AC055717.3-201ENST00000622967 595 ntBASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.73■□□□□ 0.43
CCNI2Q6ZMN8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms