Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 AC006538.1-201ENST00000567905 1585 ntBASIC17.07■□□□□ 0.32
CASC4Q6P4E1 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 SART3-203ENST00000546611 1184 ntBASIC17.07■□□□□ 0.32
CASC4Q6P4E1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.07■□□□□ 0.32
CASC4Q6P4E1 LINC01711-201ENST00000598340 967 ntBASIC17.07■□□□□ 0.32
CASC4Q6P4E1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 AC005052.1-201ENST00000625181 2492 ntBASIC17.07■□□□□ 0.32
CASC4Q6P4E1 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 AC006277.1-201ENST00000624348 1610 ntBASIC17.07■□□□□ 0.32
CASC4Q6P4E1 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASC4Q6P4E1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 SCARNA2-201ENST00000458748 420 ntBASIC17.06■□□□□ 0.32
CASC4Q6P4E1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 HLA-J-202ENST00000469281 1241 ntBASIC17.06■□□□□ 0.32
CASC4Q6P4E1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CASC4Q6P4E1 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms