Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ELK2BP-201ENST00000415014 1224 ntBASIC15.24■□□□□ 0.03
NIPAL3Q6P499 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 HLA-J-202ENST00000469281 1241 ntBASIC15.24■□□□□ 0.03
NIPAL3Q6P499 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 AC006504.4-201ENST00000592118 1568 ntBASIC15.24■□□□□ 0.03
NIPAL3Q6P499 MTHFR-217ENST00000641820 1569 ntBASIC15.24■□□□□ 0.03
NIPAL3Q6P499 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 MRPL3P1-201ENST00000400109 1033 ntBASIC15.23■□□□□ 0.03
NIPAL3Q6P499 AL031284.1-201ENST00000419297 478 ntBASIC15.23■□□□□ 0.03
NIPAL3Q6P499 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 AC009078.2-202ENST00000463353 338 ntBASIC15.23■□□□□ 0.03
NIPAL3Q6P499 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 MIR1199-201ENST00000621445 119 ntBASIC15.23■□□□□ 0.03
NIPAL3Q6P499 AC008735.5-201ENST00000623544 497 ntBASIC15.23■□□□□ 0.03
NIPAL3Q6P499 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NIPAL3Q6P499 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 ME2P1-201ENST00000426028 1970 ntBASIC15.22■□□□□ 0.03
NIPAL3Q6P499 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 AC093909.1-201ENST00000504731 1122 ntBASIC15.22■□□□□ 0.03
NIPAL3Q6P499 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 AL662844.1-201ENST00000546340 181 ntBASIC15.22■□□□□ 0.03
NIPAL3Q6P499 AC105339.3-201ENST00000560043 636 ntBASIC15.22■□□□□ 0.03
NIPAL3Q6P499 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 FAM215A-202ENST00000632077 792 ntBASIC15.22■□□□□ 0.03
NIPAL3Q6P499 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms