Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
HIST2H2BCQ6DN03 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.12□□□□□ -0.15
HIST2H2BCQ6DN03 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST2H2BCQ6DN03 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 AKR7A2P1-201ENST00000460134 915 ntBASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 AP000812.2-201ENST00000538934 718 ntBASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H2BCQ6DN03 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 AL662890.1-201ENST00000396818 632 ntBASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 TIMM17BP1-201ENST00000545713 516 ntBASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 AC092337.1-201ENST00000568699 1129 ntBASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 AC133539.2-201ENST00000604757 467 ntBASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HIST2H2BCQ6DN03 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms