Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRRK2Q5S007 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.27□□□□□ -0.13
LRRK2Q5S007 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRK2Q5S007 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRK2Q5S007 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRK2Q5S007 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 AL607033.1-201ENST00000623900 1599 ntBASIC14.26□□□□□ -0.13
LRRK2Q5S007 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRK2Q5S007 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRK2Q5S007 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRK2Q5S007 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRK2Q5S007 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRK2Q5S007 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRK2Q5S007 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 RN7SL399P-201ENST00000471648 279 ntBASIC14.26□□□□□ -0.13
LRRK2Q5S007 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 AC104982.3-201ENST00000581995 514 ntBASIC14.26□□□□□ -0.13
LRRK2Q5S007 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRK2Q5S007 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRK2Q5S007 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRK2Q5S007 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRK2Q5S007 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRK2Q5S007 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRK2Q5S007 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRK2Q5S007 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRK2Q5S007 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LRRK2Q5S007 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRK2Q5S007 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRK2Q5S007 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRRK2Q5S007 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.25□□□□□ -0.13
LRRK2Q5S007 AL591846.1-201ENST00000451736 433 ntBASIC14.25□□□□□ -0.13
LRRK2Q5S007 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRRK2Q5S007 RNA5SP410-201ENST00000516285 106 ntBASIC14.25□□□□□ -0.13
LRRK2Q5S007 KRT90P-201ENST00000549264 1064 ntBASIC14.25□□□□□ -0.13
LRRK2Q5S007 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRK2Q5S007 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRRK2Q5S007 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.25□□□□□ -0.13
LRRK2Q5S007 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRK2Q5S007 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRK2Q5S007 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRK2Q5S007 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRK2Q5S007 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRK2Q5S007 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LRRK2Q5S007 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRK2Q5S007 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRK2Q5S007 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRK2Q5S007 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRK2Q5S007 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRK2Q5S007 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LRRK2Q5S007 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
LRRK2Q5S007 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRK2Q5S007 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRK2Q5S007 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.25□□□□□ -0.13
LRRK2Q5S007 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRK2Q5S007 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.25□□□□□ -0.13
LRRK2Q5S007 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.25□□□□□ -0.13
LRRK2Q5S007 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.25□□□□□ -0.13
LRRK2Q5S007 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.25□□□□□ -0.13
LRRK2Q5S007 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
LRRK2Q5S007 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.25□□□□□ -0.13
LRRK2Q5S007 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
LRRK2Q5S007 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LRRK2Q5S007 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRK2Q5S007 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRK2Q5S007 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRK2Q5S007 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LRRK2Q5S007 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LRRK2Q5S007 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRK2Q5S007 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRK2Q5S007 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRK2Q5S007 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRK2Q5S007 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRK2Q5S007 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRK2Q5S007 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRRK2Q5S007 MIR33B-201ENST00000385104 96 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms