Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 AC131009.4-201ENST00000624048 1740 ntBASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 AL353732.1-201ENST00000569618 1459 ntBASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 MIR4492-201ENST00000581627 80 ntBASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 HLA-A-202ENST00000376806 1854 ntBASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 SLC22A20-204ENST00000530038 1673 ntBASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERC4Q5GLZ8 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 VN2R19P-201ENST00000442399 1052 ntBASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 ALG1L5P-201ENST00000482043 771 ntBASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 AC005412.3-201ENST00000580309 715 ntBASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.65■□□□□ 0.58
HERC4Q5GLZ8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.64■□□□□ 0.58
HERC4Q5GLZ8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.64■□□□□ 0.58
HERC4Q5GLZ8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HERC4Q5GLZ8 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
HERC4Q5GLZ8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 CRYGEP-201ENST00000412192 528 ntBASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 FAM185BP-201ENST00000443595 716 ntBASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 AL096865.1-201ENST00000606796 927 ntBASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HERC4Q5GLZ8 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERC4Q5GLZ8 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERC4Q5GLZ8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.63■□□□□ 0.57
HERC4Q5GLZ8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms