Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 Z83851.2-201ENST00000609564 659 ntBASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KHDC1Q4VXA5 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 LINC02012-201ENST00000608206 1725 ntBASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 PI4KAP1-204ENST00000612579 1703 ntBASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 PAWRP1-201ENST00000451083 565 ntBASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 AC108751.1-201ENST00000490852 363 ntBASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 AL671883.3-201ENST00000603274 991 ntBASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
KHDC1Q4VXA5 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 AC106730.1-201ENST00000566722 1090 ntBASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 OR7E47P-204ENST00000575924 449 ntBASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 AC004790.2-201ENST00000623588 572 ntBASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 PGM5P2-202ENST00000637225 1043 ntBASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms