Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
HLA-BQ31612 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.07■□□□□ 0.16
HLA-BQ31612 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.07■□□□□ 0.16
HLA-BQ31612 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-BQ31612 AC004790.1-201ENST00000612686 536 ntBASIC16.07■□□□□ 0.16
HLA-BQ31612 AL162274.1-201ENST00000617191 1098 ntBASIC16.07■□□□□ 0.16
HLA-BQ31612 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-BQ31612 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-BQ31612 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HLA-BQ31612 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
HLA-BQ31612 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-BQ31612 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.07■□□□□ 0.16
HLA-BQ31612 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-BQ31612 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.07■□□□□ 0.16
HLA-BQ31612 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
HLA-BQ31612 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-BQ31612 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-BQ31612 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-BQ31612 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-BQ31612 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-BQ31612 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-BQ31612 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-BQ31612 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-BQ31612 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-BQ31612 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.06■□□□□ 0.16
HLA-BQ31612 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-BQ31612 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-BQ31612 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-BQ31612 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-BQ31612 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.06■□□□□ 0.16
HLA-BQ31612 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
HLA-BQ31612 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.06■□□□□ 0.16
HLA-BQ31612 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-BQ31612 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.06■□□□□ 0.16
HLA-BQ31612 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-BQ31612 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.06■□□□□ 0.16
HLA-BQ31612 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-BQ31612 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.06■□□□□ 0.16
HLA-BQ31612 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.06■□□□□ 0.16
HLA-BQ31612 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HLA-BQ31612 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.06■□□□□ 0.16
HLA-BQ31612 SERBP1P3-201ENST00000459980 809 ntBASIC16.06■□□□□ 0.16
HLA-BQ31612 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.06■□□□□ 0.16
HLA-BQ31612 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.06■□□□□ 0.16
HLA-BQ31612 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.06■□□□□ 0.16
HLA-BQ31612 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.06■□□□□ 0.16
HLA-BQ31612 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.06■□□□□ 0.16
HLA-BQ31612 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.06■□□□□ 0.16
HLA-BQ31612 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.06■□□□□ 0.16
HLA-BQ31612 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.06■□□□□ 0.16
HLA-BQ31612 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.06■□□□□ 0.16
HLA-BQ31612 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.06■□□□□ 0.16
HLA-BQ31612 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-BQ31612 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
HLA-BQ31612 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.06■□□□□ 0.16
HLA-BQ31612 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HLA-BQ31612 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-BQ31612 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.06■□□□□ 0.16
HLA-BQ31612 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-BQ31612 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-BQ31612 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-BQ31612 AC134043.2-201ENST00000624206 2238 ntBASIC16.06■□□□□ 0.16
HLA-BQ31612 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-BQ31612 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.06■□□□□ 0.16
HLA-BQ31612 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HLA-BQ31612 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HLA-BQ31612 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-BQ31612 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-BQ31612 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-BQ31612 AL023806.1-201ENST00000603994 1649 ntBASIC16.05■□□□□ 0.16
HLA-BQ31612 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.05■□□□□ 0.16
HLA-BQ31612 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-BQ31612 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-BQ31612 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.05■□□□□ 0.16
HLA-BQ31612 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-BQ31612 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HLA-BQ31612 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-BQ31612 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
HLA-BQ31612 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-BQ31612 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HLA-BQ31612 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.05■□□□□ 0.16
HLA-BQ31612 WASH4P-201ENST00000564273 1246 ntBASIC16.05■□□□□ 0.16
HLA-BQ31612 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
HLA-BQ31612 MIR6799-201ENST00000620297 69 ntBASIC16.05■□□□□ 0.16
HLA-BQ31612 AC007431.3-201ENST00000623221 587 ntBASIC16.05■□□□□ 0.16
HLA-BQ31612 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-BQ31612 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-BQ31612 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-BQ31612 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-BQ31612 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.05■□□□□ 0.16
HLA-BQ31612 AC092053.1-201ENST00000605787 1936 ntBASIC16.05■□□□□ 0.16
HLA-BQ31612 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-BQ31612 AL390961.4-201ENST00000623958 2535 ntBASIC16.05■□□□□ 0.16
HLA-BQ31612 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-BQ31612 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-BQ31612 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HLA-BQ31612 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-BQ31612 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-BQ31612 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-BQ31612 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms