Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-1P78426 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-1P78426 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.76□□□□□ -0.05
NKX6-1P78426 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-1P78426 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-1P78426 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
NKX6-1P78426 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-1P78426 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-1P78426 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
NKX6-1P78426 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-1P78426 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.76□□□□□ -0.05
NKX6-1P78426 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NKX6-1P78426 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.76□□□□□ -0.05
NKX6-1P78426 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-1P78426 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-1P78426 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-1P78426 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-1P78426 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-1P78426 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
NKX6-1P78426 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-1P78426 AL139400.1-201ENST00000366220 510 ntBASIC14.76□□□□□ -0.05
NKX6-1P78426 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-1P78426 IGLL3P-201ENST00000412472 434 ntBASIC14.76□□□□□ -0.05
NKX6-1P78426 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.76□□□□□ -0.05
NKX6-1P78426 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.76□□□□□ -0.05
NKX6-1P78426 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.76□□□□□ -0.05
NKX6-1P78426 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NKX6-1P78426 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.76□□□□□ -0.05
NKX6-1P78426 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.76□□□□□ -0.05
NKX6-1P78426 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.76□□□□□ -0.05
NKX6-1P78426 AC010507.1-201ENST00000633895 436 ntBASIC14.76□□□□□ -0.05
NKX6-1P78426 AC007064.4-201ENST00000637740 555 ntBASIC14.76□□□□□ -0.05
NKX6-1P78426 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-1P78426 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NKX6-1P78426 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.76□□□□□ -0.05
NKX6-1P78426 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-1P78426 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-1P78426 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.76□□□□□ -0.05
NKX6-1P78426 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-1P78426 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.76□□□□□ -0.05
NKX6-1P78426 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-1P78426 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-1P78426 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-1P78426 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-1P78426 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-1P78426 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-1P78426 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-1P78426 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
NKX6-1P78426 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.75□□□□□ -0.05
NKX6-1P78426 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-1P78426 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
NKX6-1P78426 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-1P78426 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-1P78426 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
NKX6-1P78426 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
NKX6-1P78426 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-1P78426 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
NKX6-1P78426 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.75□□□□□ -0.05
NKX6-1P78426 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
NKX6-1P78426 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-1P78426 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-1P78426 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-1P78426 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
NKX6-1P78426 HLA-J-203ENST00000494367 1087 ntBASIC14.75□□□□□ -0.05
NKX6-1P78426 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.75□□□□□ -0.05
NKX6-1P78426 OR7E47P-204ENST00000575924 449 ntBASIC14.75□□□□□ -0.05
NKX6-1P78426 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.75□□□□□ -0.05
NKX6-1P78426 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-1P78426 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-1P78426 EGFEM1P-202ENST00000431685 1563 ntBASIC14.75□□□□□ -0.05
NKX6-1P78426 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-1P78426 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
NKX6-1P78426 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.75□□□□□ -0.05
NKX6-1P78426 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.75□□□□□ -0.05
NKX6-1P78426 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-1P78426 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
NKX6-1P78426 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-1P78426 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-1P78426 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
NKX6-1P78426 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-1P78426 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.75□□□□□ -0.05
NKX6-1P78426 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.75□□□□□ -0.05
NKX6-1P78426 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-1P78426 AC093525.9-201ENST00000624961 1746 ntBASIC14.75□□□□□ -0.05
NKX6-1P78426 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-1P78426 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-1P78426 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
NKX6-1P78426 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-1P78426 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
NKX6-1P78426 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-1P78426 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-1P78426 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-1P78426 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.74□□□□□ -0.05
NKX6-1P78426 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-1P78426 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-1P78426 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
NKX6-1P78426 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-1P78426 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
NKX6-1P78426 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
NKX6-1P78426 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms