Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP46P62068 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP46P62068 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
USP46P62068 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP46P62068 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.55■□□□□ 0.4
USP46P62068 FAM58DP-201ENST00000428076 619 ntBASIC17.55■□□□□ 0.4
USP46P62068 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
USP46P62068 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.55■□□□□ 0.4
USP46P62068 RN7SL589P-201ENST00000481268 310 ntBASIC17.55■□□□□ 0.4
USP46P62068 MIR3909-201ENST00000579518 119 ntBASIC17.55■□□□□ 0.4
USP46P62068 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP46P62068 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.55■□□□□ 0.4
USP46P62068 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP46P62068 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP46P62068 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP46P62068 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.55■□□□□ 0.4
USP46P62068 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP46P62068 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP46P62068 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP46P62068 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP46P62068 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
USP46P62068 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.55■□□□□ 0.4
USP46P62068 WASH6P-202ENST00000359512 1437 ntBASIC17.55■□□□□ 0.4
USP46P62068 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
USP46P62068 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP46P62068 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USP46P62068 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP46P62068 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
USP46P62068 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP46P62068 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
USP46P62068 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.54■□□□□ 0.4
USP46P62068 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.54■□□□□ 0.4
USP46P62068 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
USP46P62068 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USP46P62068 SNX33P1-201ENST00000592116 1762 ntBASIC17.54■□□□□ 0.4
USP46P62068 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP46P62068 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP46P62068 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
USP46P62068 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP46P62068 AC005237.2-201ENST00000434368 219 ntBASIC17.54■□□□□ 0.4
USP46P62068 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.54■□□□□ 0.4
USP46P62068 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.54■□□□□ 0.4
USP46P62068 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.54■□□□□ 0.4
USP46P62068 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.54■□□□□ 0.4
USP46P62068 LINC01225-203ENST00000563550 1244 ntBASIC17.54■□□□□ 0.4
USP46P62068 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.54■□□□□ 0.4
USP46P62068 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.54■□□□□ 0.4
USP46P62068 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP46P62068 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP46P62068 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP46P62068 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP46P62068 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP46P62068 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP46P62068 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USP46P62068 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
USP46P62068 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP46P62068 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
USP46P62068 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.54■□□□□ 0.4
USP46P62068 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
USP46P62068 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.54■□□□□ 0.4
USP46P62068 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
USP46P62068 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USP46P62068 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP46P62068 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP46P62068 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP46P62068 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
USP46P62068 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP46P62068 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP46P62068 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP46P62068 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP46P62068 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP46P62068 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
USP46P62068 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP46P62068 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.53■□□□□ 0.4
USP46P62068 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
USP46P62068 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP46P62068 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.53■□□□□ 0.4
USP46P62068 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.53■□□□□ 0.4
USP46P62068 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP46P62068 AL645728.1-201ENST00000366221 2101 ntBASIC17.53■□□□□ 0.4
USP46P62068 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP46P62068 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP46P62068 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP46P62068 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP46P62068 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
USP46P62068 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP46P62068 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP46P62068 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.53■□□□□ 0.4
USP46P62068 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.53■□□□□ 0.4
USP46P62068 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP46P62068 HLA-J-203ENST00000494367 1087 ntBASIC17.53■□□□□ 0.4
USP46P62068 RFPL4AP1-201ENST00000530883 850 ntBASIC17.53■□□□□ 0.4
USP46P62068 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.53■□□□□ 0.4
USP46P62068 AC013467.2-201ENST00000605472 835 ntBASIC17.53■□□□□ 0.4
USP46P62068 AL355385.1-201ENST00000606123 409 ntBASIC17.53■□□□□ 0.4
USP46P62068 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP46P62068 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
USP46P62068 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
USP46P62068 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.53■□□□□ 0.4
USP46P62068 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms