Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S1P61966 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
AP1S1P61966 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S1P61966 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S1P61966 TFAMP1-201ENST00000412727 736 ntBASIC16.77■□□□□ 0.28
AP1S1P61966 AC211486.1-202ENST00000416371 468 ntBASIC16.77■□□□□ 0.28
AP1S1P61966 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.77■□□□□ 0.28
AP1S1P61966 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S1P61966 AC211476.1-201ENST00000503899 468 ntBASIC16.77■□□□□ 0.28
AP1S1P61966 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
AP1S1P61966 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.77■□□□□ 0.28
AP1S1P61966 AC026120.1-201ENST00000611536 926 ntBASIC16.77■□□□□ 0.28
AP1S1P61966 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
AP1S1P61966 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
AP1S1P61966 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
AP1S1P61966 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
AP1S1P61966 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP1S1P61966 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
AP1S1P61966 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP1S1P61966 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP1S1P61966 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S1P61966 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
AP1S1P61966 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S1P61966 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S1P61966 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S1P61966 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
AP1S1P61966 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S1P61966 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
AP1S1P61966 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S1P61966 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S1P61966 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
AP1S1P61966 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.76■□□□□ 0.27
AP1S1P61966 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S1P61966 GGT3P-204ENST00000453783 1664 ntBASIC16.76■□□□□ 0.27
AP1S1P61966 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S1P61966 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.76■□□□□ 0.27
AP1S1P61966 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S1P61966 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S1P61966 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S1P61966 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S1P61966 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S1P61966 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
AP1S1P61966 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.76■□□□□ 0.27
AP1S1P61966 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.76■□□□□ 0.27
AP1S1P61966 AC004967.1-201ENST00000453589 447 ntBASIC16.76■□□□□ 0.27
AP1S1P61966 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.76■□□□□ 0.27
AP1S1P61966 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.76■□□□□ 0.27
AP1S1P61966 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
AP1S1P61966 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.76■□□□□ 0.27
AP1S1P61966 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.76■□□□□ 0.27
AP1S1P61966 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.76■□□□□ 0.27
AP1S1P61966 AL135744.1-201ENST00000565098 629 ntBASIC16.76■□□□□ 0.27
AP1S1P61966 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.76■□□□□ 0.27
AP1S1P61966 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S1P61966 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.76■□□□□ 0.27
AP1S1P61966 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S1P61966 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
AP1S1P61966 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.76■□□□□ 0.27
AP1S1P61966 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
AP1S1P61966 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S1P61966 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.76■□□□□ 0.27
AP1S1P61966 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S1P61966 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S1P61966 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.75■□□□□ 0.27
AP1S1P61966 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
AP1S1P61966 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S1P61966 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S1P61966 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S1P61966 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.75■□□□□ 0.27
AP1S1P61966 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S1P61966 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S1P61966 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.75■□□□□ 0.27
AP1S1P61966 FLJ38576-201ENST00000623820 2459 ntBASIC16.75■□□□□ 0.27
AP1S1P61966 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S1P61966 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S1P61966 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.75■□□□□ 0.27
AP1S1P61966 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S1P61966 NKILA-202ENST00000614771 2598 ntBASIC16.75■□□□□ 0.27
AP1S1P61966 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
AP1S1P61966 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.75■□□□□ 0.27
AP1S1P61966 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.75■□□□□ 0.27
AP1S1P61966 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S1P61966 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
AP1S1P61966 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S1P61966 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.75■□□□□ 0.27
AP1S1P61966 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
AP1S1P61966 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
AP1S1P61966 AP006288.1-201ENST00000446065 395 ntBASIC16.75■□□□□ 0.27
AP1S1P61966 SPDYE11-202ENST00000450699 704 ntBASIC16.75■□□□□ 0.27
AP1S1P61966 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S1P61966 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
AP1S1P61966 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
AP1S1P61966 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
AP1S1P61966 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.75■□□□□ 0.27
AP1S1P61966 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S1P61966 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.75■□□□□ 0.27
AP1S1P61966 SPDYE9P-201ENST00000570642 692 ntBASIC16.75■□□□□ 0.27
AP1S1P61966 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.75■□□□□ 0.27
AP1S1P61966 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.75■□□□□ 0.27
AP1S1P61966 SPDYE10P-202ENST00000612005 668 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms